Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03968 ATGGGAGACCCTTACTCCAATTTCTTCTCACCACCTTTCTTCCACTACCCCTCTCCAAACCCTCCCCCCCACCACCATCCATATGCTCACAACTTCATCAACCAAACCACCAACATCAACCACACCACCTTTTTCCACTTCCAACACCACCACCACTTTCAAACCACTACCACCACTTATTCTTCTTCTCCCCCTTCCCCTCCCTTGAGAGAGGCCCTTCCTCTTCTCAGTCTCAGCCCAAAAAATGATGAACAAGAGGAGTACCTGGATCAGGATCAGGTTTGCACTGCCATGGATGTGGAAGAGAACTTCAACAGGACCCTCCATAACCCCAAAGAAGAGGAGCAAGAAGAGGATGGTGGTGATGACAGTGTCACTGTTGCACTCCACATAGGGTTGCCAAGCCCTAGTGCTGCTGAGATAGCTTCTGTGCTGTCTTCAGCTTGTGCCACAGACAAAGAGCAACAGCAAGGGGGAGGTGGAGGAGGAGATTGTAATAATAATGGGATTCAGGATTCTTCTTCAGCCTTCTTGTCCAACAGCCTCAACAAGGGACAGTACTGGATCCCTACCCCTTCTCAGATTCTCATTGGTCCTACACAGTTCTCTTGTCCAGTTTGTTGCAAAACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCACGGATCACAGTACAGAAAAGGGCCTGAATCTCTGAGGGGTACCCAACCAACAGGTATGCTTAGGCTTCCATGCTATTGTTGTTCCCCAGGATGCAGGAACAACATTGATCACCCAAGAGCAAAGCCCCTTAAAGATTTCAGAACTCTTCAAACACACTACAAGAGGAAGCATGGAATCAAGCCCTTCATGTGTAGAAAATGTGGTAAGAGTTTTGCAGTGAGAGGTGATTGGAGGACCCATGAAAAGAACTGTGGGAAGCTTTGGTATTGCATCTGTGGCTCTGATTTCAAGCACAAGAGGTCTCTTAAAGATCACATCAAAGCTTTTGGAAGTGGCCATGCAGCTTATGGGATCGATGGATTTGAAGAAGAAGAAGAGCCTGCATCTGAAGTAGAACAAGACAATGACTAA 1083 0.4728 MGDPYSNFFSPPFFHYPSPNPPPHHHPYAHNFINQTTNINHTTFFHFQHHHHFQTTTTTYSSSPPSPPLREALPLLSLSPKNDEQEEYLDQDQVCTAMDVEENFNRTLHNPKEEEQEEDGGDDSVTVALHIGLPSPSAAEIASVLSSACATDKEQQQGGGGGGDCNNNGIQDSSSAFLSNSLNKGQYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKSFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAYGIDGFEEEEEPASEVEQDND* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03968 360 ProSiteProfiles Zinc finger C2H2 type domain profile. 286 306 IPR013087 -
Phac7g03968 360 ProSitePatterns Zinc finger C2H2 type domain signature. 204 224 IPR013087 -
Phac7g03968 360 ProSiteProfiles Zinc finger C2H2 type domain profile. 202 229 IPR013087 -
Phac7g03968 360 Gene3D Classic Zinc Finger 264 340 - -
Phac7g03968 360 FunFam Zinc finger protein WIP2 255 337 - -
Phac7g03968 360 Gene3D Classic Zinc Finger 201 224 - -
Phac7g03968 360 PANTHER ZINC FINGER PROTEIN WIP2 36 358 IPR043584 GO:0003700|GO:0010468
Phac7g03968 360 SMART c2h2final6 202 224 IPR013087 -
Phac7g03968 360 SMART c2h2final6 286 306 IPR013087 -
Phac7g03968 360 SUPERFAMILY beta-beta-alpha zinc fingers 268 306 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03968 Phac-Chr7 40191925 40195016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03968 1 360 C2H2 Transcription Factor Family AT3G57670 60.677 5.80e-147 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g03968 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03968 - - gmx:100783088 549.666