Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03964 ATGGAGAGCTGCAAAAACTCCCCTCTAAAACCATGGAAGAAAGGGCCAACAAGGGGCAAAGGTGGCCCCCAAAATGCCTCATGTGAGTATAGAGGTGTTAGGCAGAGAACATGGGGCAAATGGGTGGCTGAGATAAGAGAGCCTAAGAAGAGATCAAGACTCTGGCTTGGCTCCTTTGCCACAGCAGAGGAAGCTGCTTTGGCCTATGATGAGGCTGCAAGGAGACTCTATGGTCCTGATGCTTACCTCAACCTCCCCCACATGCAACCAAACCTCATAAACTCCACCACCAGATCTCAAAAGTTCAAGTGGTTCCCTTCCAAGAACTTCATCTCCATGTTCCCTTCACGTGGATTGCTCAACCTCAATGCTCAACCGAGTGTCCATGTCATCCACCAGAGGCTGCAACAGCTTAAGCAAAATGGGGTGGTTGCAACAACAACAACAACTCAACCACCACAGTCTACTCATCCAAGGGTGGCAGAACTTGAGAACTTAGTCAGCCAAAACCACTCAGAGACTCTGCCTCCACTTCCCCAAGATTCTCAAGTTTCACCACCAAAAATAATTGGTGATTCTGAGGAGAAACCCGAGATAGACCTGCTTGAGTTTCTTCAACAGATGGGAATACTAAAAGATGAAAGAGAGGCAGAGAAAACTGATAGCTCGGGAAGCTCAACAGTGTCTGAAGCTGCATCAAGAGATGAAAATGAACAAGCAGGAGTGTTTTCTGACATGAGTAGTGTTAACTGGGAGGAATTGATTGAGATGCATGACCATGAAGTTGTGTGTAACTATCTTGCATCAGAAGAAATCCAGTTTGAAGCATATGACATAAACGAGGACCTTACTTTCTCCACTTCCATTTGGAACAACTAA 879 0.4608 MESCKNSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRSRLWLGSFATAEEAALAYDEAARRLYGPDAYLNLPHMQPNLINSTTRSQKFKWFPSKNFISMFPSRGLLNLNAQPSVHVIHQRLQQLKQNGVVATTTTTQPPQSTHPRVAELENLVSQNHSETLPPLPQDSQVSPPKIIGDSEEKPEIDLLEFLQQMGILKDEREAEKTDSSGSSTVSEAASRDENEQAGVFSDMSSVNWEELIEMHDHEVVCNYLASEEIQFEAYDINEDLTFSTSIWNN* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03964 292 MobiDBLite consensus disorder prediction 222 243 - -
Phac7g03964 292 MobiDBLite consensus disorder prediction 1 27 - -
Phac7g03964 292 FunFam Ethylene-responsive transcription factor 2 28 87 - -
Phac7g03964 292 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Phac7g03964 292 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Phac7g03964 292 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Phac7g03964 292 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Phac7g03964 292 MobiDBLite consensus disorder prediction 214 243 - -
Phac7g03964 292 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 255 - -
Phac7g03964 292 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Phac7g03964 292 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Phac7g03964 292 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Phac7g03964 292 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03964 Phac-Chr7 40127457 40128588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03964 5 291 AP2-EREBP Transcription Factor Family AT3G57600 51.546 4.16e-93 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac7g03964 AP2 2.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03964 - - gmx:100808363 431.795