Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03962 ATGGACGGTGGCGAAGATTCTTCGGCATTGGCTTGGGTTTGGGTCATTGAAGCTCTATCAGCCTGTAAAGCAATCTCGACTCCCATGTTGCAGGGTTTGATTGATTCAGCACCTGTCGGGATGGATAAATTTGGTGAAATTACAAAGGAGATAGTTTCTTTGAGGTGTTTGGAGGAACTGCCCACTAGTGTGGTTGAACGTGTAGCTTCTTCTACATCGGATTCCAGAGATAGATTTGATTTTTCGCGGGGTTGTCAAGATGTCCTCCAGGAAATATTGAATGAGACCCCATTATCAAATCTGAGAATGACTGGAGCAGAGCTTTTGAAATCAGATGTTTACCCGTTTATTAATCACAAAAGAGCTGGCACTTTGAAATGTCACTTAGAGCAGCTGAGACAAACAATCTTGGAAGGCACACATCCTCATACTGATTACTTGAAAGAAAGGAGTGGATTATTTCCTCAGAATAATGGTTATTCAGTGATTGTAAATGATGTCAAACGTGATGATCATTCAGCTAAGGAAGTTGGGAACTCCACCAATACTGAAAATATGGTAGGAAAAGATATCTCAGTGTCCTTAACTTTAGAGAATGGGAATAAAACTTCCAAAGAACACTTGCTTGATAATAATTCTTCACCCTCCACGAGGAGTACGGTTTACTCAGCTGATGATTATCTTACAGAACACTTTGATAGAAAGCAAGTCTGTCTAAATGAATGTGATGATTTCTGTAGAACTTCAAAGAGGGTTAAATTTTCTGCATCTACAAGTTTTGAGTCTAAGAAAGAGAAGCCAGTTTCTCAACTCAAACAGGAAGTGTCAGAACATTTAACTGAAAGAATTCTTCTAGTTTCTGAACGAGGAGATCATCATGTAGAAAATAATAACAAAGAAACTCTGGGTGGTGGGTCCTCAGAGGATATTCCCAATAAATGCACTGTTTCAAAATTGTGCCAACCTAGCAGCCATATTGAAGTTCCCCGTGATGAATCAAATACTCCTTTTAATGATGCTTTGATGCTTCAACCTACATTTGGTGCTGAAAATTCTCAGCAACTGCAGGTCGAGTCAATTCCACATGTTGCACTCTCAGATGGAATCCAGCTTGAGATTTCCGGAGGTAAACCTAGGTCTAAACATGAAAAAGATTTACAACTCAAAGATCCAAATGACTCACAGCAGCAAATTGCTCCTGTTAAAGCTCCAGATCATACTGGGAATGGCTGTGGGGTAGAGAAATCAGGTGATATTGTGTATCAAGGTGAAAAAGTTAGCCTTGAAATGGAAAAGCAGGCAGAAAAAAATCTTTGTTTGAAGCGAAATGAAAGTGATCAATTACCAATTTCTGATGTAAATCTCATCCAACCAGTGGTTACTGAATGTTGTCTTGGTATGACAACTACCATTCCAACAAATGATGCTAAGGCAGAAAACAATCAGCAAGTAATTAATCTACAGCAACCCAAACAGACAGAACCAGATATCGCAGCTTTAAATCTCTCCCAGGAGCCAGTTGTTTGCAATAAAACTATAGTTGGTGCAGTTACTGGTTGTGGAGCAGAGCTATCAAGTGATAGTGATGGATATCACTACGAAAAAAAATGTCTTGAAGCAAAAAAGCATGAATTCCTGTGCTCCCACTTCACAGTTGATCAAGATTTCTCAGCAATGAATGAACTAAATAAACACAATCTTTGCATGAAGTGTCATCAAGGTGGCCAATTACTGGCTTGTAAAACCACTACTTGTCCATTGATGGTGCATGAAGACTGTCTAGGTGCATCTGCACAATTGGATGCAAAGGGCAACTTTTTTTGCCCATTTTGTGCATATTCTCGCTCTATTTCAGAATATGTTGAAGCTAAGGAAAAAGCTTCCTTGGCAAGGAAGGACTTGACCATCTTTATTAGTAAAGGTAAAATGAGTCAAGCTGCTGACAATCTTCTTTATGAATTTCGTACGCAAGAACATTGTTTTTCAAGAAAGAGTAGTGAGTGTGAACATATTCATGTAAAAAACAACAAAGATGATCAGTTGACAAGGTGTGAAGACAATAGAGAAGGTCATGTTGGTGAGCATGCAAATGAAGCCAATAATCTTCAGTTTGGAAGAAGTCAGCAACAAAATTCATCATGCAGAGAAAAGGAAAATGTAAGCAATGGATCAGTTGAAATTTTAAGAGAAGAGAAAATTGGTGAAATGCGAAATGCAAAGAACATAACTGGTGTAAGAGTTGAAGAAAATGAAGTGCCAACTGACCATGTAGATGGACATGATGTTGACACATGTTCTATTCAAGAAACAAATAATGCCCTTGTTAATAAAAGCAATGCTGGATATGAAACTCCACAAGAAATGACAAAACAGCAAGATATTGATGGAGCAACAGAGCCAGTTTGTGCACATAATACTGGAAAAGAGGAAATGTCTGAAATTGAATGTGATAAACATAGTACTTCTAGTTCTAGATACTCCATGAGATACCGTAAACATGAAATGCAATGCAAACCCCAGGCACGCCCAGTATTTCAGGGTAATCAATTAAGACGAAAAAAAATTCATTGGACAGCTGAGGAGGAAGAGATGTTAAGGGAGGGAGTACAGAAGTTTGGTTTCGATGACCCAAGGAAGTGGAAAAACATTTTGGCATTTGGTTCTCATGTGTTTGAGAAAGTTGGTAAGCGTCGTACACCACAAGACCTGAAGGATAAATGGAAGAACATGTGCAAAGCTCACTCAAAATCAAAATGA 2757 0.3867 MDGGEDSSALAWVWVIEALSACKAISTPMLQGLIDSAPVGMDKFGEITKEIVSLRCLEELPTSVVERVASSTSDSRDRFDFSRGCQDVLQEILNETPLSNLRMTGAELLKSDVYPFINHKRAGTLKCHLEQLRQTILEGTHPHTDYLKERSGLFPQNNGYSVIVNDVKRDDHSAKEVGNSTNTENMVGKDISVSLTLENGNKTSKEHLLDNNSSPSTRSTVYSADDYLTEHFDRKQVCLNECDDFCRTSKRVKFSASTSFESKKEKPVSQLKQEVSEHLTERILLVSERGDHHVENNNKETLGGGSSEDIPNKCTVSKLCQPSSHIEVPRDESNTPFNDALMLQPTFGAENSQQLQVESIPHVALSDGIQLEISGGKPRSKHEKDLQLKDPNDSQQQIAPVKAPDHTGNGCGVEKSGDIVYQGEKVSLEMEKQAEKNLCLKRNESDQLPISDVNLIQPVVTECCLGMTTTIPTNDAKAENNQQVINLQQPKQTEPDIAALNLSQEPVVCNKTIVGAVTGCGAELSSDSDGYHYEKKCLEAKKHEFLCSHFTVDQDFSAMNELNKHNLCMKCHQGGQLLACKTTTCPLMVHEDCLGASAQLDAKGNFFCPFCAYSRSISEYVEAKEKASLARKDLTIFISKGKMSQAADNLLYEFRTQEHCFSRKSSECEHIHVKNNKDDQLTRCEDNREGHVGEHANEANNLQFGRSQQQNSSCREKENVSNGSVEILREEKIGEMRNAKNITGVRVEENEVPTDHVDGHDVDTCSIQETNNALVNKSNAGYETPQEMTKQQDIDGATEPVCAHNTGKEEMSEIECDKHSTSSSRYSMRYRKHEMQCKPQARPVFQGNQLRRKKIHWTAEEEEMLREGVQKFGFDDPRKWKNILAFGSHVFEKVGKRRTPQDLKDKWKNMCKAHSKSK* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03962 918 ProSiteProfiles Zinc finger PHD-type profile. 565 614 IPR019787 -
Phac7g03962 918 SMART sant 853 913 IPR001005 -
Phac7g03962 918 ProSiteProfiles Myb-like domain profile. 849 911 IPR001005 -
Phac7g03962 918 MobiDBLite consensus disorder prediction 376 390 - -
Phac7g03962 918 MobiDBLite consensus disorder prediction 700 720 - -
Phac7g03962 918 Pfam Myb-like DNA-binding domain 857 913 - -
Phac7g03962 918 SUPERFAMILY FYVE/PHD zinc finger 561 615 IPR011011 -
Phac7g03962 918 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 851 915 IPR017930 -
Phac7g03962 918 SUPERFAMILY Homeodomain-like 851 912 IPR009057 -
Phac7g03962 918 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 560 621 IPR013083 -
Phac7g03962 918 ProSitePatterns Zinc finger PHD-type signature. 568 611 IPR019786 -
Phac7g03962 918 MobiDBLite consensus disorder prediction 695 721 - -
Phac7g03962 918 SMART PHD_3 567 612 IPR001965 -
Phac7g03962 918 Gene3D - 847 914 - -
Phac7g03962 918 MobiDBLite consensus disorder prediction 373 411 - -
Phac7g03962 918 CDD SANT_TRF 857 912 - -
Phac7g03962 918 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 11 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03962 Phac-Chr7 40118984 40126017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03962 847 913 Single Myb Histone (SMH) Gene Family AT1G17520 49.254 7.55e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac7g03962 Myb_DNA-bind_6 3.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03962 - - ccaj:109810464 1161.36