Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03953 ATGTTGTGGGGAGCACTTGGTTTTCTTCCACCACCAAAGGAAGGTGAATCAATGGTTGATGTTACGACTCAATTTTTGCATGAACTATGGACAAGATCATTTCTTTCAGATTATATTGACTACGGGGGTGATTGTAGCTTTAGATTGCATGATTTGGTGACTGATCTTGCAGTGTCTATTGGGAAAGGCGAGTTTGAAAGAATAGATCTCCGCAATTCAAAAATATCTGATGGTGTCCAACATTTGGCATTTGAGGAAAATATGTTTAATAGTGAAGCTCATCTTCCCACAGGTCTCAGAACTATGATATTTCATAATGGAAGGAACAATAAAGATTTCTTGAATACATTGCTGTCAAGGTGCAAATACTTGAGGATTTTAGACTTACGACATTCCAAATACGAAAGTCTGCCTCGCTGCATTGGAAAGTTGAAACATTTAAGATACCTCAGTCTTGCACAAAATCAGGAACTCAAGGAACTCCCTGATTCAGTCTGCAAACTTCAAAATTTGCAAACTTTGATCCTTAGTGGATGCATAAAGCTACAAACTTTACCCAAAAGAATAAATAATCTAATTAGCCTTCGTCACTTGGCTATAACCACCACATTACCTGTTTTTCCAAAAGAAGTGATTGCAAATTTGACTTCTTTAGAAAATTTATATTTTAGTGATTGTGATAATTTGGAGTCATTGTTTGAAGGAATACAACTTTCCACACTTAAAACTTTGTTTTTGTACGAATGTGCAAGGCTAAAGTCGGTGTCCTTCCATGCCATAAAAAATTTAGAGGTTTTACTGATCTCCAACTGCGACAAGTTGGAATTGTCATTAGGTCTTGAAGGCCAAATCTCCAATTCAAGGTTAAAATATCTTGTTCTTAATTCTTTGCCACAACTGATCACTTTGCCTCTATGGTTACAAGGATCTGTGGACTCTTTACAATCCTTGGCAATTGAAGATTGCATCAATCTTGAGGAGCTTCCTGAGTGGCTACCATCTTTAATTTGTCTCAAAGTTCTTCAAATTTCTAATAGTCCAAATATGTTGTCACTTCCTGATAACATGCATGACCTCACAAATCTTGAAAACTTGGAAATAGTAGGTTGTCCTGAAATATTCAAAAGATTCCAGCCAAACGTTGGACAAGATTGGCACAAGATATCACACATAAAAAAACTCGCTTCTGGTGCCGTGGAAGAAGCTTCTTTGGCGTTTGGTGTACATAGCGAGCTACAACAGATGAAAGCAACTATGGCACTCATCAGAGGTGTGCTCTTAGATGCTGCGCAACAGAATCCGCTGAGTAGTGCACTAAGCGAATGGCTGAGACAGGTCAAGCACGTCTTTTCTGATGCTGAAGACATAGTTGATGATTTTGAGTGCGAAGCCTTGCGGAAGCACGTTGTCAAAACCTATGGTGGCATCTCAAGGAAGAATGGCGCATCAAATTCAAGATATCAACACCAGGTTGGCCAAACTTGCAGCCCAAAGAAACATGTTTGGCCTTCAAATCATTCACCAAGATACACGTGTGGTGCACGACTTGGTCTTCTCCCACCACCAAAAAAAGGTGAATCAGTAAATGACGTTGCAAGTAAATTTTTGCACGAACTGTGGACAAGATCGTTTCTTTCAGATTATGTTGACCTTGGAGGTGACGGTCTTTTTACAATGCATGATTTGGTGATTGATCTTGCATTGTATGTTGGGAAAGGTGAGTTTGAAATAATAAATTTCCACAATCCAAAAATATTTGAGGGTGCCCGACATTTGTCATTTGGGAAAGATATTTTTTATGGTGACTATCTTCTTCCCACAGGTCTTAGAACTATGATACTTTCTAATGAAGAGAACAATAAAGATTTCTTGAATACATTGGTGTCAAGGTGCAAATGCTTGAGGATTTTACTTATGCATGGTTTCAAATATGAGAGTCTGCCTCGTTGCATCGGAAAGTTGAAACATTTAAGAGTCCTTAGTCTTTCAAACAATGGAGAACTTAAGGAACTCCCTGATTCAATCTGCAAACTTCAAAATTTACAAACTTTGTTCCTTAATGGATGCATAAAGCTACAAGCGTTACCCAAAGGAATAAAAAATCTAATTAGCCTTCGTCAATTGGTTATAACTACCACACTACGTGAGTTTCCTAAAGCGATTGCAGATTTGATTTCTTTAGAAAAATTATATTTGGTTGATTGTCGTAATTTGGAGTCGTTGTTTGAAGGAATGCAACTTTCCACACTTAAAACTTTCTATTTGTCAGATTGTATAAGTCTGAAGTCAGTGTCCTTCCATGCCATTAAAAATTTAGAGGTTTTATTTATCACCAATTGCGACAAGTTGGAATTGTCAATGGGTGTTGGAAGCCAAATTCCCAATTCAATGTTAAAGATTCTTTATTTTGAAGCCTTGCCGCAACTTATGACATTTCCTCAGTGGTTACAAGGATCTGCGAACTCTTTACAATCCTTGGCAATTCATTGTTGCGTTAATCTTGAGGAGCTTCCCGAGTGGCTACCATCTCTAATTTATCTCAAACAACTTCAGATATCCAATAATCCAAATATGTTGTCACTTCCTGATAACATGCATCACCTCACTAATCTTGAAGACTTATATATCACAGGTTGTCCTGAACTATGCAAAAGATTAGAACCAAACATTGGACAGGACTGGCACAAGATATCACACGTCAAAAAAATTTACATTGAATCTCTCGTAGGGAAGCTCGCTTCTCGTGCCGTCGAAGAAGCTTCTTTGGCATTTGGTGTGCATAGCGAGTTACAAGAGATGAAAGAAACTATGACACTCATCAGAGGTGTGCTCTTAGATGCTCAGCAAAAGAATCCGCTGAGCAGTGCACTGAGCGAATGGCTGAGACAGGTCAAGCGCGTCTTTTCTAATGCTGAAGACATAGTTGATGATTTTGAGTGCGAAGCCTTGCGGAAGCACGTTGTCAAAACCTATGGTGACTGTTCAAGGAAGGTTGGCCAAACTTGCAGCCCAACGAAACATGTTTGGCCTTCAAATCATTCACCAAGATACACGTGTGGTGCACATGAGGGAAATGACTCATTCTCATGTAAATCCTTCCAATGTTACAGGAAGGGAACATGA 3123 0.3878 MLWGALGFLPPPKEGESMVDVTTQFLHELWTRSFLSDYIDYGGDCSFRLHDLVTDLAVSIGKGEFERIDLRNSKISDGVQHLAFEENMFNSEAHLPTGLRTMIFHNGRNNKDFLNTLLSRCKYLRILDLRHSKYESLPRCIGKLKHLRYLSLAQNQELKELPDSVCKLQNLQTLILSGCIKLQTLPKRINNLISLRHLAITTTLPVFPKEVIANLTSLENLYFSDCDNLESLFEGIQLSTLKTLFLYECARLKSVSFHAIKNLEVLLISNCDKLELSLGLEGQISNSRLKYLVLNSLPQLITLPLWLQGSVDSLQSLAIEDCINLEELPEWLPSLICLKVLQISNSPNMLSLPDNMHDLTNLENLEIVGCPEIFKRFQPNVGQDWHKISHIKKLASGAVEEASLAFGVHSELQQMKATMALIRGVLLDAAQQNPLSSALSEWLRQVKHVFSDAEDIVDDFECEALRKHVVKTYGGISRKNGASNSRYQHQVGQTCSPKKHVWPSNHSPRYTCGARLGLLPPPKKGESVNDVASKFLHELWTRSFLSDYVDLGGDGLFTMHDLVIDLALYVGKGEFEIINFHNPKIFEGARHLSFGKDIFYGDYLLPTGLRTMILSNEENNKDFLNTLVSRCKCLRILLMHGFKYESLPRCIGKLKHLRVLSLSNNGELKELPDSICKLQNLQTLFLNGCIKLQALPKGIKNLISLRQLVITTTLREFPKAIADLISLEKLYLVDCRNLESLFEGMQLSTLKTFYLSDCISLKSVSFHAIKNLEVLFITNCDKLELSMGVGSQIPNSMLKILYFEALPQLMTFPQWLQGSANSLQSLAIHCCVNLEELPEWLPSLIYLKQLQISNNPNMLSLPDNMHHLTNLEDLYITGCPELCKRLEPNIGQDWHKISHVKKIYIESLVGKLASRAVEEASLAFGVHSELQEMKETMTLIRGVLLDAQQKNPLSSALSEWLRQVKRVFSNAEDIVDDFECEALRKHVVKTYGDCSRKVGQTCSPTKHVWPSNHSPRYTCGAHEGNDSFSCKSFQCYRKGT* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03953 1040 SMART LRR_typ_2 144 168 IPR003591 -
Phac7g03953 1040 SMART LRR_typ_2 654 678 IPR003591 -
Phac7g03953 1040 Pfam Rx N-terminal domain 391 478 IPR041118 -
Phac7g03953 1040 Pfam Rx N-terminal domain 905 993 IPR041118 -
Phac7g03953 1040 SUPERFAMILY L domain-like 48 373 - -
Phac7g03953 1040 Pfam Leucine rich repeat 123 179 IPR001611 GO:0005515
Phac7g03953 1040 Gene3D Ribonuclease Inhibitor 791 902 IPR032675 -
Phac7g03953 1040 Gene3D Ribonuclease Inhibitor 238 383 IPR032675 -
Phac7g03953 1040 Gene3D Ribonuclease Inhibitor 605 763 IPR032675 -
Phac7g03953 1040 Gene3D Ribonuclease Inhibitor 42 233 IPR032675 -
Phac7g03953 1040 Gene3D - 905 1011 - -
Phac7g03953 1040 Gene3D - 389 491 - -
Phac7g03953 1040 SUPERFAMILY L domain-like 558 883 - -
Phac7g03953 1040 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 770 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03953 Phac-Chr7 40084337 40093024 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03953 634 736 WRKY Transcription Factor Family AT4G12020 38.462 4.48e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03953 - - vra:106771654 508.064