Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03938 ATGGCTGCATTTACTACTATCCACACGCCCCTCTTCCCCACCAACACCACTCTTCCAAAGCTATCATCTTTTCAACCTTTCTTCCCTACCCAACTTCTTGGCCTACCCTTATCATCTTCTTTTTCCGCCGCCAAAAGATTATCTTCCTTCACTTGCAAGCCCATCAAATGTTCTGTTTCCGAAGCCACAGAACCCAAAACTGGTGAGAAGAAGAAACAATTGTTGAGAAGAGGGGACGTGAGAAACATAGCAATTGTGGCTCATGTTGATCATGGAAAGACTACTCTCGTTGATGCCATGCTCAAACAAACTAAGGTATTTCGTGATAATCAATTTGTGCAGGAAAGGATAATGGACTCGAATGATTTGGAGCGCGAAAGAGGGATCACAATACTGAGTAAAAATACGTCTGTCACCTATAAAGACACAAAGATCAATATAATAGATACTCCAGGTCACTCTGATTTTGGGGGTGAAGTGGAGCGTGTCTTAAATATGGTGGAAGGGATCCTTCTAGTGGTAGATTCGGTTGAAGGACCAATGCCACAGACAAGATTTGTCTTGAAAAAGGCTTTAGAGTTTGGTCATTCAGTTGTTGTGGTTGTGAATAAAATAGATAGACCTTCTGCTCGCCCAGAGTTTGTTGTCAATTCGACTTTTGAACTCTTCATTGAACTAAATGCCACAGACGAACAGTGTGACTTTCAAGTAATCTATGCAAGTGGTATAAAAGGGAAAGCAGGTTTGTCGCCTGAAGATCTGGCCGATGACCTTGGTCCATTGTTTGAATCCATCATTAGATGCATCCCTGGACCGCGCATTGTTAAAGATGGTGCTCTTCAAATGCTGGTGACAAATATTGAGTATGATGAACATAAAGGGCGTATTGCGATTGGACGTGTGCTAGCTGGAACTTTAGGAAAAGGCATGGATGTTCGAGTATGTACTTCAGAAGATTCGTGTAGATTTGGAAGAATTAGTGAGCTCTATGTGTATGACAAATTCAGTAGGGTTCCTGCAGATAATGTGGAGGCAGGTGATATATGTGCAGTGTGTGGAATTACTGACATTCAGATTGGGGAGACAATTGCTGATAAAGTATATGGGAAGCCACTACCTTCCATCAAGGTGGAAGAACCAACAGTGAAAATGTCTTTCTCCATAAACACTTCACCTTTTGTTGGCCGTGAGGGAAAGTATGTTACTAGTAGGAATTTAAGGGATAGGCTTTATCGTGAACTTGAGCGGAATCTGGCTATGAAAGTTGAAGATGGTGAAACAGCTGATACATTTGTTGTTAGTGGGCGTGGAACTCTGCATATAACTATACTCATAGAAAATATGCGAAGAGAAGGTTATGAATTCATGGTTGGACCTCCCAAAGTTATCAACAAGAAGCTGAATGACCAACTTTTGGAACCCTACGAGGTTGCAACTGTGGAGGTACCAGAAGAGCACATGGGAGCTGTTGTTGAACTTCTTGGCAAGAGACGAGGACAGATGTTTGACATGCAAGGAGTTGGGTTTTGCTATGGAGTAATCTTGTTTTGCTGTTGA 1557 0.4213 MAAFTTIHTPLFPTNTTLPKLSSFQPFFPTQLLGLPLSSSFSAAKRLSSFTCKPIKCSVSEATEPKTGEKKKQLLRRGDVRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVTYKDTKINIIDTPGHSDFGGEVERVLNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHSVVVVVNKIDRPSARPEFVVNSTFELFIELNATDEQCDFQVIYASGIKGKAGLSPEDLADDLGPLFESIIRCIPGPRIVKDGALQMLVTNIEYDEHKGRIAIGRVLAGTLGKGMDVRVCTSEDSCRFGRISELYVYDKFSRVPADNVEAGDICAVCGITDIQIGETIADKVYGKPLPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFVVSGRGTLHITILIENMRREGYEFMVGPPKVINKKLNDQLLEPYEVATVEVPEEHMGAVVELLGKRRGQMFDMQGVGFCYGVILFCC* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03938 518 Pfam Elongation factor G C-terminus 470 505 IPR000640 -
Phac7g03938 518 SUPERFAMILY EF-G C-terminal domain-like 378 462 IPR035647 -
Phac7g03938 518 Gene3D - 78 273 IPR027417 -
Phac7g03938 518 Gene3D - 464 510 - -
Phac7g03938 518 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 77 248 - -
Phac7g03938 518 SUPERFAMILY Translation proteins 226 373 IPR009000 -
Phac7g03938 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 278 IPR027417 -
Phac7g03938 518 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 119 134 IPR031157 -
Phac7g03938 518 Gene3D Translation factors 275 374 - -
Phac7g03938 518 CDD TypA_BipA 79 272 IPR047041 -
Phac7g03938 518 CDD BipA_III 380 458 IPR047043 -
Phac7g03938 518 FunFam GTP-binding protein TypA 77 273 - -
Phac7g03938 518 CDD BipA_TypA_II 280 373 IPR047042 -
Phac7g03938 518 Pfam Elongation factor Tu domain 2 294 363 IPR004161 GO:0005525
Phac7g03938 518 PRINTS GTP-binding elongation factor signature 198 207 IPR000795 GO:0003924|GO:0005525
Phac7g03938 518 PRINTS GTP-binding elongation factor signature 126 134 IPR000795 GO:0003924|GO:0005525
Phac7g03938 518 PRINTS GTP-binding elongation factor signature 82 95 IPR000795 GO:0003924|GO:0005525
Phac7g03938 518 PRINTS GTP-binding elongation factor signature 146 156 IPR000795 GO:0003924|GO:0005525
Phac7g03938 518 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 78 273 IPR000795 GO:0003924|GO:0005525
Phac7g03938 518 Pfam Elongation factor Tu GTP binding domain 80 270 IPR000795 GO:0003924|GO:0005525
Phac7g03938 518 NCBIfam small GTP-binding protein domain 81 229 IPR005225 GO:0005525
Phac7g03938 518 Gene3D Elongation Factor G (Translational Gtpase), domain 3 375 463 - -
Phac7g03938 518 FunFam GTP-binding protein TypA 274 374 - -
Phac7g03938 518 FunFam GTP-binding protein TypA 381 487 - -
Phac7g03938 518 SUPERFAMILY EF-G C-terminal domain-like 471 508 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03938 Phac-Chr7 39980691 39988902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03938 80 207 Eukaryotic Initiation Factors Gene Family AT3G22980 44.615 1.65e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03938 K06207 - gmx:100785222 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g03938 7 39980691 39988902 Phac7g03938 7 39980691 39988902 ECH