Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03932 ATGGGAACTCCCGAATTCCCAGATCTGGGAAAGCACTGTTCGGTCTCTGATTGCAAGTTGATCGATTTCTTGCCCTTTACCTGCGATCGCTGCAACCAGGTGTATTGTTTGGAGCACAGAGGTTATATTAAACATCAGTGTCCAAAAGCTGACAAGAAAGATGTTACTGTAGTTATATGTCCCCTTTGTGCTAAAGGAGTTCGCCTAGTTCCTGATCAAGATCCAAATATAACTTGGGAGAATCATGTCAATACTGATTGTGACCCATCGAACTATGAGAAAGTCACAAAGAAGAAAAAATGCCCTGTCCCAGGATGCAGAGAGATATTAGGATTCTCAAACACAATTAAGTGCAGGGACTGCACGGTAGACCATTGTTTAAAGCATCGGTTCGGACCTGATCATAAATGTCCTGGTCCCAGAAAAATGGAAACAAGTTTTTCATTTAGGAATATTTTGAATGTGAATAAAAAACAGGAGTCCAAACCCCAGTCAAGTTCATCTGCATCATCAAGATGGTCTACAAACTTTCTTAATGCAGTTTCTAACATTCGAGCATCAGCAGAGGCTGGTGTGTCGAAGTTGAGTGAAGTTAACCAAGGCTGGTGGACAGCATCAGGGGGGGTGGGATCGAGCCATAGCAGTGGTCAAGTGGAGCAATGCCCTCAGTGTGGTACCAAGTTTTCCTCTGTTACTGCTTTGGTGGACCACGTGCAAAAAGTTCATGAAAGGAGTGGCAAGCGATCTGGAGCAAAGGTTACAATTGATGTTTGCCCAAAGTGTAGTAGAGGATTCCGGGATCCTGTTTCCCTTGTGGAACATGTTGAGAGGGATCATGGAGGCAGTTCTAGATCATAA 858 0.4394 MGTPEFPDLGKHCSVSDCKLIDFLPFTCDRCNQVYCLEHRGYIKHQCPKADKKDVTVVICPLCAKGVRLVPDQDPNITWENHVNTDCDPSNYEKVTKKKKCPVPGCREILGFSNTIKCRDCTVDHCLKHRFGPDHKCPGPRKMETSFSFRNILNVNKKQESKPQSSSSASSRWSTNFLNAVSNIRASAEAGVSKLSEVNQGWWTASGGVGSSHSSGQVEQCPQCGTKFSSVTALVDHVQKVHERSGKRSGAKVTIDVCPKCSRGFRDPVSLVEHVERDHGGSSRS* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03932 285 Gene3D - 2 60 IPR035896 -
Phac7g03932 285 Gene3D Classic Zinc Finger 198 282 - -
Phac7g03932 285 Pfam C2H2-type zinc finger 220 242 - -
Phac7g03932 285 Gene3D - 80 152 IPR035896 -
Phac7g03932 285 SUPERFAMILY AN1-like Zinc finger 4 59 IPR035896 -
Phac7g03932 285 ProSitePatterns Zinc finger C2H2 type domain signature. 221 242 IPR013087 -
Phac7g03932 285 Pfam Zinc finger, C2H2 type 257 279 IPR013087 -
Phac7g03932 285 ProSiteProfiles Zinc finger C2H2 type domain profile. 256 284 IPR013087 -
Phac7g03932 285 Pfam AN1-like Zinc finger 101 140 IPR000058 GO:0008270
Phac7g03932 285 Pfam AN1-like Zinc finger 13 52 IPR000058 GO:0008270
Phac7g03932 285 ProSitePatterns Zinc finger C2H2 type domain signature. 258 279 IPR013087 -
Phac7g03932 285 ProSiteProfiles Zinc finger AN1-type profile. 95 145 IPR000058 GO:0008270
Phac7g03932 285 ProSiteProfiles Zinc finger AN1-type profile. 7 55 IPR000058 GO:0008270
Phac7g03932 285 SMART c2h2final6 256 279 IPR013087 -
Phac7g03932 285 SMART c2h2final6 219 242 IPR013087 -
Phac7g03932 285 SUPERFAMILY AN1-like Zinc finger 93 146 IPR035896 -
Phac7g03932 285 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 5 247 - -
Phac7g03932 285 SMART AN1_Zf_4 13 52 IPR000058 GO:0008270
Phac7g03932 285 SMART AN1_Zf_4 101 142 IPR000058 GO:0008270
Phac7g03932 285 FunFam AN1-type zinc finger protein 2B isoform X1 3 64 - -
Phac7g03932 285 SUPERFAMILY beta-beta-alpha zinc fingers 220 275 IPR036236 -
Phac7g03932 285 ProSiteProfiles Zinc finger C2H2 type domain profile. 219 247 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03932 Phac-Chr7 39942495 39946663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03932 1 285 C2H2 Transcription Factor Family AT2G41835 63.542 2.74e-127 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g03932 zf-AN1 4.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03932 - - gmx:100786272 508.834