Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03920 ATGGAGGAAGAAAGTGAGAAAGGGTTGTTGGAGTGTATGAGAAAATTGTCAACAGCACCCTTTTTGTTGAAGACATACATGTTGGTTGAGGATCCTTCCACCAATGATGTTGTGTCGTGGAATGATGATGGAACAACGTTTGTGGTGTTGCAACCTGCGGAGTTTGCTCGTGATCTTCTTCCAACTCTCTTCAACCATTGCAACTTCTCTAGCTTTCTTCGCCAGCTCAGTACTTATGGTTTTCGTAAAGTTGCCACAAGCAGATGGGAGTTTTGCAACGAGCGATTCAGAAAGGGTGAGAAAGAACTTCTATGCGAGATTAGACGTAAGAAACCACGCGTGAGGAAGAGACAACACACCAATAATATTGATGAAGATCAAAGGTTCTTAGTATCAGCCTTTTCTTCAGATTATGCAATTCTGATGGATGAAAACAAGCGACTGAAGAAGGAGAATGGGGTGTTGCACTCAGAGCTCACAACCATGAAGAGGAAGTGCAGGGACTTGCTGGATCTGGTGACCAAATATTCATGTGCAATGGAAGAAGGGGTGGATCAGAAGCCATTGTCGTTTTGCCTGAGATTGGAAGAAGTTCAAGGAAAAAGGCGAAGAAAATAG 618 0.4337 MEEESEKGLLECMRKLSTAPFLLKTYMLVEDPSTNDVVSWNDDGTTFVVLQPAEFARDLLPTLFNHCNFSSFLRQLSTYGFRKVATSRWEFCNERFRKGEKELLCEIRRKKPRVRKRQHTNNIDEDQRFLVSAFSSDYAILMDENKRLKKENGVLHSELTTMKRKCRDLLDLVTKYSCAMEEGVDQKPLSFCLRLEEVQGKRRRK* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03920 205 Gene3D - 13 111 IPR036388 -
Phac7g03920 205 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 188 IPR027725 -
Phac7g03920 205 FunFam Heat stress transcription factor B-4 13 111 - -
Phac7g03920 205 PRINTS Heat shock factor (HSF) domain signature 59 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g03920 205 PRINTS Heat shock factor (HSF) domain signature 21 44 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g03920 205 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g03920 205 Pfam HSF-type DNA-binding 21 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g03920 205 SUPERFAMILY "Winged helix" DNA-binding domain 18 110 IPR036390 -
Phac7g03920 205 SMART hsfneu3 17 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03920 Phac-Chr7 39848283 39851601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03920 20 176 HSF AT2G41690 53.371 3.72e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phac7g03920 HSF_DNA-bind 3.4e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03920 K09419 - cave:132161782 263.462