Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03915 ATGGGGAGGGGGAAGATTGAGATTAAGAAAATTGAGAATTTGAACAGCAGACAGGTTACCTTTTCCAAGAGGAGGAATGGTTTGCTGAAGAAGGCCAGAGAATTGTCTGTTCTATGTGATGCTGAGGTTGCTGTCATCATATTCTCTAGCACTGGCAAGCTTTATGAGTTTTCAAACACAAGCATGGAACATTCCATTTCAAGGTATAGCAAAGGGACAGAATTGGATTCTGCAGAGCAACCTATTGATGTGCCCCCAAAAGATGTTTTGGTTATGGAGCCTGATACTAACCTTTTGAAGGACGAAATAACAAAGCTTCGATCGGCATACTTAAATATGATGGGTAAGGAGCTTGATGGGTTGAGCCTTAAGGAATTGCAGCACCTAGAAAATCAACTGAGTGAAGGGATACTAGCTGTCAAAGAAAAAAAGGAACAAGTACTTGTAGAACAGCTTAGGAGGTCCAGGATACAGGAGCAGAAAGCTGTGCTGGAAAATGAAGTTCTGCGCAAACAGGTTGTCAACAGATTATGGTCGGCAGAGGAAAGGATTGAAAATAGAAGCTTGCAATGA 573 0.4188 MGRGKIEIKKIENLNSRQVTFSKRRNGLLKKARELSVLCDAEVAVIIFSSTGKLYEFSNTSMEHSISRYSKGTELDSAEQPIDVPPKDVLVMEPDTNLLKDEITKLRSAYLNMMGKELDGLSLKELQHLENQLSEGILAVKEKKEQVLVEQLRRSRIQEQKAVLENEVLRKQVVNRLWSAEERIENRSLQ* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03915 190 CDD MADS_MEF2_like 2 76 IPR033896 GO:0000977|GO:0045944
Phac7g03915 190 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Phac7g03915 190 Pfam K-box region 95 173 IPR002487 GO:0003700|GO:0005634|GO:0006355
Phac7g03915 190 SUPERFAMILY SRF-like 2 77 IPR036879 GO:0003677|GO:0046983
Phac7g03915 190 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Phac7g03915 190 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Phac7g03915 190 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Phac7g03915 190 Gene3D - 13 81 IPR036879 GO:0003677|GO:0046983
Phac7g03915 190 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Phac7g03915 190 FunFam MADS-box transcription factor MADS-MC 13 83 - -
Phac7g03915 190 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Phac7g03915 190 ProSiteProfiles K-box domain profile. 89 179 IPR002487 GO:0003700|GO:0005634|GO:0006355
Phac7g03915 190 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 155 - -
Phac7g03915 190 Coils Coil 126 146 - -
Phac7g03915 190 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03915 Phac-Chr7 39813647 39818178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03915 1 173 MADS-box Gene Family AT5G13790 55.491 1.44e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Phac7g03915 K-box 3.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03915 - - gmx:100792278 299.286