Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03892 ATGGCTGCAAATGAAGATGCTGCGCAGGAATTTGAACCAAAGAAGAAGCCACCAACAGAGGATGAGAAGAGGAAGAAGAAAATTATGCCTGGGAGTTTGATGAAAGCTTTGATGAGGCCTGGAGGAGGTGATGCTGGACCTTCAGATGGTGATCAGATTATCTATCACTGCACCATTCGAACTTTGGATGGAGTACTTGTGGAATCTACCAGATCTGATTATGGAGGCAAAGGCACCCCAATACGGCATGTTTTGGGCAAAAGCAAGATGTTATTGGGCTTACTAGAAGGAATTCCTACAATGTTGAAGGGTGAAGTGGCAATGTTCAAGATGAAGCATCAGTTGCATTATGGTGAAGATGATTGTCCTATTTCCGCCCCTGATGGTTTTCCTAAGGACGACGAACTTCATTTCGAAATTGAGCTGATAGATTTTTTCAAAGCAAAGGTTGTTACTGATGATTTGGGAGTCGTAAAAAAGGTTGTGCAAGAAGGGCAGGGCTGGGAATCTCCAAGAGAACCTTATGAAGTAAAGGCTTGGATATCGGCAAAGACAGTTACTGGGAAATTGATCATGTCACATACAGAAGGAGAACCATACTTTTTTACATTTGGAAAATCAGAGCTACCTAAGGGCCTTGAAATGGCGATAGGAACAATGGTTCGGGAAGAGAAGGCTGTTGTATATGTTACCACTCAGTATTTAACCGAGTCTCCTTTGATGCCTGTAATAGAAGATTATGATGAAGTCCATTTTGAAGTGGAGCTGGTTCACTTTATTCAGGTGAGGGACATGCTTGGAGATGGGCGCCTAATAAAACGCCGAATACATGATGGCAAAGGTGATTTTCCCATGGATTGTCCCCTTCATGACAGTCTACTTCGTGTTCATTACAAGGGTACTGTTCTCAATGAAGAAAAGAAGGTTTTTTATGATACAAGGGTAGACAATGATGGTCAACCATTAGAGTTCAGTTCTGGAGAAGGGCTTGTACCAGAGGGATTTGAAATGAGTGTTCGTCTGATGCTTCCTGGAGAGATATCTCTCGTCACATGCCCTCCAGACTATGCCTATGATAAATTTCCAAGGCCTTCAAATGTCCCTGAGGGTGCTCATATTCAATGGGAAATTGAGCTTCTAAGTTTTGAAACGCCAAAGGACTGGACAGGATTGGACTTTAAAACTATAATGAATGAAGCTGAAAGCATCAGAAACACGGGTAACAAGCTGTTCAAAGAAGGGAAATATGAACTTGCCAAGGCAAAGTATGAAAAGTTGCTTCGAGAGTTTAATCATATCAATCCTCAAGATGATGAAGAAGGAAAGATTTTTGCAGACACAAGAAATTTGCTACATCTGAATGTTGCTGCATGCCATCTAAAATTGGGAGAATGCAAAAAGTCCATTGAGACTTGCAATAAGGTTTTGGATGCAAATCCTGTACATGTCAAGGGCCTTTATCGGCGTGGAATGGCCTACATGACTGCTGGAGATTTTGAAGAAGCAAGGGCTGATTTCAAAATGATGATGAAAGTTGACAAGTCAACTGAATCAGATGCAACTGCAGCTCTTCAAAAACTGAAGCAGAAGGAGCAGGAAGTCGAGAAGAAAGCTAGGAAACAGTTTAAAGGGCTATTTGACAAGAAGCCTGGAGAAATTGCGGAAGCTAAAGGTGATGCTGATGGAGATCAAATAACAAGCGAAAGCCTGAAGGATGAAGTACATGGGGACTCTGATGAAACAAGTTTTGAGGATTCACATGAACCACCACCTGAGGCACCTCGAAATAGTTGGTTCTCTCTCTTTTGGCCTTCTGGTAGAAGACTTTTTGAATCACTTGGGCTTAATAGATGTGCCATACTTTAA 1866 0.4191 MAANEDAAQEFEPKKKPPTEDEKRKKKIMPGSLMKALMRPGGGDAGPSDGDQIIYHCTIRTLDGVLVESTRSDYGGKGTPIRHVLGKSKMLLGLLEGIPTMLKGEVAMFKMKHQLHYGEDDCPISAPDGFPKDDELHFEIELIDFFKAKVVTDDLGVVKKVVQEGQGWESPREPYEVKAWISAKTVTGKLIMSHTEGEPYFFTFGKSELPKGLEMAIGTMVREEKAVVYVTTQYLTESPLMPVIEDYDEVHFEVELVHFIQVRDMLGDGRLIKRRIHDGKGDFPMDCPLHDSLLRVHYKGTVLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMSVRLMLPGEISLVTCPPDYAYDKFPRPSNVPEGAHIQWEIELLSFETPKDWTGLDFKTIMNEAESIRNTGNKLFKEGKYELAKAKYEKLLREFNHINPQDDEEGKIFADTRNLLHLNVAACHLKLGECKKSIETCNKVLDANPVHVKGLYRRGMAYMTAGDFEEARADFKMMMKVDKSTESDATAALQKLKQKEQEVEKKARKQFKGLFDKKPGEIAEAKGDADGDQITSESLKDEVHGDSDETSFEDSHEPPPEAPRNSWFSLFWPSGRRLFESLGLNRCAIL* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03892 621 Gene3D - 149 260 IPR046357 GO:0003755
Phac7g03892 621 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 50 146 IPR001179 GO:0003755
Phac7g03892 621 FunFam Peptidylprolyl isomerase 150 260 - -
Phac7g03892 621 ProSiteProfiles TPR repeat profile. 483 516 IPR019734 GO:0005515
Phac7g03892 621 MobiDBLite consensus disorder prediction 554 591 - -
Phac7g03892 621 FunFam Peptidylprolyl isomerase 7 149 - -
Phac7g03892 621 MobiDBLite consensus disorder prediction 1 29 - -
Phac7g03892 621 MobiDBLite consensus disorder prediction 554 597 - -
Phac7g03892 621 FunFam Peptidylprolyl isomerase 388 544 - -
Phac7g03892 621 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 291 383 IPR001179 GO:0003755
Phac7g03892 621 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 292 380 IPR001179 GO:0003755
Phac7g03892 621 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 143 IPR001179 GO:0003755
Phac7g03892 621 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 173 257 IPR001179 GO:0003755
Phac7g03892 621 SUPERFAMILY FKBP-like 23 149 - -
Phac7g03892 621 FunFam Peptidylprolyl isomerase 261 385 - -
Phac7g03892 621 Gene3D - 261 387 IPR046357 GO:0003755
Phac7g03892 621 Gene3D - 1 148 IPR046357 GO:0003755
Phac7g03892 621 SMART tpr_5 483 516 IPR019734 GO:0005515
Phac7g03892 621 SMART tpr_5 449 482 IPR019734 GO:0005515
Phac7g03892 621 SMART tpr_5 400 433 IPR019734 GO:0005515
Phac7g03892 621 Pfam Tetratricopeptide repeat 484 507 IPR019734 GO:0005515
Phac7g03892 621 SUPERFAMILY TPR-like 397 539 IPR011990 GO:0005515
Phac7g03892 621 Gene3D Tetratricopeptide repeat domain 394 548 IPR011990 GO:0005515
Phac7g03892 621 PANTHER INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 149 261 - -
Phac7g03892 621 Coils Coil 517 540 - -
Phac7g03892 621 SUPERFAMILY FKBP-like 151 259 - -
Phac7g03892 621 MobiDBLite consensus disorder prediction 8 29 - -
Phac7g03892 621 SUPERFAMILY FKBP-like 266 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03892 Phac-Chr7 39667410 39688836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03892 47 548 Calmodulin-binding Proteins AT5G48570 30.273 4.28e-62 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03892 - - gmx:100527937 1142.1