Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac7g03890 | ATGGAAGTGGAGAAGGAAAACATTGCATCGACTATTACTGCAGAACCATCTTTACCTGCCTCTGATGGTCAAGATACTATTTCGGATAATGCATCTCTACCCCATTCAATACAACCTGTTATTCCACTGGTTATTGCTCCTTCTGTTGTTCCTCCTTTAGCTCCAATTCCTGCAATTCCTCCCCCTCGCCCGCTGGCACCACTTCCAGTTCGGCCACCAGTCATTAGGCCACTCGTGCCACAAAATGGCGAGGTTGGATCTAGTGACTCTGACTCGGACAATGATGACTCAAATGGAAGAATTAACCAGGGGACTGGGGAGTATGAGGTATCTGAAGAGAGTAGACTGGTGAGAGATCGGCAGGAGAAGGCAATGCAGGAACTCATGATGAAGAGGCGTGCAGCTGCACTTGCTGTTCCTACGAATGACATGGCTGTGCGAGCTCGGCTTCGGCATCTTGGCGAGCCAATAACTCTGTTTGGTGAGAGAGAGATGGAGAGGCGGGACAGGTTGCGGATGATTATGGCGAAGCTAGATGCAGAAGGTCAGTTGGAGAAGCTGATGAAAGCTCACGAGGACGAAGAAGCTGCGGCTTCTGCTCCAAAAGACGAGGCTGAGGAAGAACTGCAGTATCCTTTTTACACTGAAGGGTCAAAGGCTCTCCTGGATGCCAGAATTTATATTACTAAATATTCTTTAGCGAGGGCAGCATTACGGATTCAACGGGCACAAAGAAGAAGGGATGATCCAGATGAAGATATGGATGCAGAGATTGATTGGGCATTAACACAGGCTGGGAATTTGAATCTCGAATTCAGTGAGATTGGAGATGATCGACCACTTTCTGGTTGCTCCTTCTCAAGGGATGGAAAATGTCTTGCTACCTGTTCTCTGACTGGAGCTTCGAAGTTGTGGAGCATGCCCAAAATAGAAAAGCGTTCCACCTTGAAAGGGCACACAGAACGTGCTACTGATGTTGCTTTTTCTCCTATTCATGATCATTTAGCAACTGCCTCTGCTGATCGAACAGCAAAGTATTGGAATGATCAAGGATCACTTTTGAAAACATTCGGGGGTCATCTAGACCGTCTTGCACGTATTGCCTTCCATCCATCAGGGAAGTACCTGGGCACTGCTAGTTTTGACAAGACATGGAGATTATGGGACATAGAGACAGGGGAGGAGTTGCTTCTTCAAGAAGGGCATAGTAGAAGTGTGTATGGTTTGGCTTTCCACCGTGATGGATCATTAGCTGCATCTTGTGGACTAGATTCTCTGGCTCGTGTTTGGGACCTCCGAACTGGAAGAAGTATTCTTGCACTGGAAGGTCATGTCAAGCCGGTTCTTGGCATCAGTTTTTCACCTAATGGATATCATCTAGCCACTGGTGGCGAAGACAACACATGTCGGATTTGGGATTTGAGGAAGAAGAAATCCTTCTATACTATTCCTGCTCACTCCAATTTAATATCACAAGTTAAATTTGAGCCACAAGAAGGTTACTTTTTGGTAACTGCCTCATATGACATGACTGCTAAGGTTTGGTCAGGCCGTGACTTTAAGCCTGTGAAGACACTATCTGGGCATGAAGCAAAAGTTACCTCTGTGGATGTTCTTGGAGATGGCGGCCACATTGTTACTGTCTCCCATGATCGCACCATAAAACTGTGGTCCAGCAATACGACTAACGAACAAGCAATGGATGTTGATTAA | 1713 | 0.4647 | MEVEKENIASTITAEPSLPASDGQDTISDNASLPHSIQPVIPLVIAPSVVPPLAPIPAIPPPRPLAPLPVRPPVIRPLVPQNGEVGSSDSDSDNDDSNGRINQGTGEYEVSEESRLVRDRQEKAMQELMMKRRAAALAVPTNDMAVRARLRHLGEPITLFGEREMERRDRLRMIMAKLDAEGQLEKLMKAHEDEEAAASAPKDEAEEELQYPFYTEGSKALLDARIYITKYSLARAALRIQRAQRRRDDPDEDMDAEIDWALTQAGNLNLEFSEIGDDRPLSGCSFSRDGKCLATCSLTGASKLWSMPKIEKRSTLKGHTERATDVAFSPIHDHLATASADRTAKYWNDQGSLLKTFGGHLDRLARIAFHPSGKYLGTASFDKTWRLWDIETGEELLLQEGHSRSVYGLAFHRDGSLAASCGLDSLARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSFYTIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSVDVLGDGGHIVTVSHDRTIKLWSSNTTNEQAMDVD* | 571 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac7g03890 | 570 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 441 | 482 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | FunFam | U4/U6 small nuclear ribonucleoprotein Prp4 | 484 | 560 | - | - | |
Phac7g03890 | 570 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 357 | 398 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 526 | 567 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | Pfam | pre-mRNA processing factor 4 (PRP4) like | 146 | 172 | IPR014906 | - | |
Phac7g03890 | 570 | CDD | WD40 | 280 | 558 | - | - | |
Phac7g03890 | 570 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 483 | 525 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | Gene3D | - | 260 | 442 | IPR015943 | GO:0005515 | |
Phac7g03890 | 570 | PRINTS | G protein beta WD-40 repeat signature | 460 | 474 | IPR020472 | - | |
Phac7g03890 | 570 | PRINTS | G protein beta WD-40 repeat signature | 335 | 349 | IPR020472 | - | |
Phac7g03890 | 570 | PRINTS | G protein beta WD-40 repeat signature | 376 | 390 | IPR020472 | - | |
Phac7g03890 | 570 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 316 | 348 | - | - | |
Phac7g03890 | 570 | SUPERFAMILY | PRP4-like | 124 | 179 | IPR036285 | - | |
Phac7g03890 | 570 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Phac7g03890 | 570 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 399 | 440 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | MobiDBLite | consensus disorder prediction | 76 | 117 | - | - | |
Phac7g03890 | 570 | Gene3D | - | 117 | 186 | IPR036285 | - | |
Phac7g03890 | 570 | FunFam | U4/U6 small nuclear ribonucleoprotein PRP4-like protein | 256 | 440 | - | - | |
Phac7g03890 | 570 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 460 | 474 | IPR019775 | - | |
Phac7g03890 | 570 | Pfam | WD domain, G-beta repeat | 314 | 348 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | Pfam | WD domain, G-beta repeat | 439 | 473 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | Pfam | WD domain, G-beta repeat | 521 | 558 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | Pfam | WD domain, G-beta repeat | 351 | 389 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | Pfam | WD domain, G-beta repeat | 400 | 431 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 399 | 436 | - | - | |
Phac7g03890 | 570 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 357 | 394 | - | - | |
Phac7g03890 | 570 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 316 | 348 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 526 | 558 | - | - | |
Phac7g03890 | 570 | SMART | WD40_4 | 309 | 348 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | SMART | WD40_4 | 350 | 389 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | SMART | WD40_4 | 519 | 558 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | SMART | WD40_4 | 392 | 431 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | SMART | WD40_4 | 267 | 306 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | SMART | WD40_4 | 434 | 473 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | SMART | WD40_4 | 476 | 516 | IPR001680 | GO:0005515 | |
Phac7g03890 | 570 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 483 | 516 | - | - | |
Phac7g03890 | 570 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 376 | 390 | IPR019775 | - | |
Phac7g03890 | 570 | SMART | pr04_2 | 141 | 194 | IPR014906 | - | |
Phac7g03890 | 570 | MobiDBLite | consensus disorder prediction | 10 | 33 | - | - | |
Phac7g03890 | 570 | PANTHER | WD40 REPEAT PROTEIN | 91 | 559 | - | - | |
Phac7g03890 | 570 | SUPERFAMILY | WD40 repeat-like | 270 | 557 | IPR036322 | GO:0005515 | |
Phac7g03890 | 570 | Coils | Coil | 177 | 197 | - | - | |
Phac7g03890 | 570 | Gene3D | - | 443 | 568 | IPR015943 | GO:0005515 | |
Phac7g03890 | 570 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 418 | 432 | IPR019775 | - | |
Phac7g03890 | 570 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 441 | 475 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac7g03890 | 361 | 557 | U-box Gene Family | AT2G33340 | 22.172 | 2.27e-09 | 58.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac7g03890 | K12662 | - | gmx:100788948 | 943.725 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phac7g03890 | 7 | 39660355 | 39663050 | Phac7g03890 | 7 | 39660355 | 39663050 | ECH |