Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03866 ATGTCCCTCGAAGACTCTCTAAGATCTCTCTCTCTCGACTACCTCAACCTTCTCATCAATGGCCAGGCCTTCAGCGACGTCACTTTCCAAGTCGAGGGCCGTCTCGTCCACGCGCACCGCTGCATCTTGGCCGCGCGTAGCCTCTTCTTCCGAAAATTCTTCTGCGGGCCCGACTCTCCGCCGGGCCTCGACCCCGCCGCCGCCTCGCGAGCCGCTGCCGCCTCCGGAGCGCGCCCTCCCGGCGTGATCCCCGTGAACTCCGTCGGCTACGAGGTTTTCTTGCTGCTGCTGCAGTTCCTGTACAGTGGACAAGTCTCCATCGTGCCGCAGAAGCACGAGGCCAGACCCAATTGCGGCGAGCGAGGGTGCTGGCACACGCATTGCACCTCCGCCGTTGATCTCGCCCTCGACACCCTCGCCGCCGCCAGATACTTCGGCGTTGAACAACTTGCATTGCTCACTCAGAAACAACTTGCGAGCATGGTGGAGAAAGCCTCAATCGACGATGTGATGAAAGTGTTGATAGCATCTCGAAAGCAGGAAATGCAGCAGCTGTGGAGCACGTGCTCCCACCTGGTGGCCAAGTCGGGTCTTCCGCCGGAGGTGCTGGCCAAGCACCTCCCCATCGACGTCGTCGCCAAGATCGAGGAGCTCCGCCTCAAATCCTCCCTCGCGCGCCGCTCCATGCTGCCGCTCCGCCACCCGCACCAGCACCCCGACCTGGGCGCCGCCGACATGGAGGACCAGAAAATCCGGCGGATGAGGCGCGCGCTCGACTCCTCCGACGTGGAGCTCGTGAAGCTCATGGTCATGGGGGAGGGCCTCAACCTGGACGAGGCGCTGGCGTTGCACTACGCCGTGGAGAGTTGCAGCAGGGAGGTGGTGAAGGCGCTGCTGGAGCTGGGCGCGGCGGACGTCAACTTCCCGGCCGGTCCGGCCGGGAAGACTCCTCTGCACGTGGCGGCGGAGATGGTGTCCCCGGAGATGGTGGCGGTGTTGCTGGACCACCACGCTGACCCGAACGTGCGAACGGTGGACGGCGTGACTCCGTTGGACATCCTCCGAACCCTAACCTCTGACTTCCTCTTCAAAGGGGCAGTTCCTGGTCTCACCCACATTGAGCCCAACAAGCTCAGGCTCTGCTTGGAGCTCGTGCAATCTGCAGCGCTCGTTTTGTCTCGTGAAGAAGGAAACAACCATGCTAACAACACCAACGACAACACTAACAACAGCAACACTTCTTCTGCTATCTATCCACCAATGAGCGAAGAGCACAGCAGCAGCAATTTGGACTCCAGACTGGTGTATCTCAACCTCGGCGCCACGCCGCAAATAGGTGACGATGATAACAGCCAGAGGGAAGCCATGAACCGTCATGGCTCGCATGGCGGTGGATGTGACCCTTCAATGTACCATCACTCTCATGACTTCTAG 1434 0.6095 MSLEDSLRSLSLDYLNLLINGQAFSDVTFQVEGRLVHAHRCILAARSLFFRKFFCGPDSPPGLDPAAASRAAAASGARPPGVIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEARPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLASMVEKASIDDVMKVLIASRKQEMQQLWSTCSHLVAKSGLPPEVLAKHLPIDVVAKIEELRLKSSLARRSMLPLRHPHQHPDLGAADMEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALHYAVESCSREVVKALLELGAADVNFPAGPAGKTPLHVAAEMVSPEMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGNNHANNTNDNTNNSNTSSAIYPPMSEEHSSSNLDSRLVYLNLGATPQIGDDDNSQREAMNRHGSHGGGCDPSMYHHSHDF* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03866 477 FunFam regulatory protein NPR5 isoform X1 4 195 - -
Phac7g03866 477 ProSiteProfiles BTB domain profile. 25 109 IPR000210 GO:0005515
Phac7g03866 477 MobiDBLite consensus disorder prediction 397 429 - -
Phac7g03866 477 ProSiteProfiles Ankyrin repeat region circular profile. 313 343 - -
Phac7g03866 477 Pfam BTB/POZ domain 16 111 IPR000210 GO:0005515
Phac7g03866 477 SMART BTB_4 25 162 IPR000210 GO:0005515
Phac7g03866 477 Gene3D Potassium Channel Kv1.1; Chain A 4 195 IPR011333 -
Phac7g03866 477 SMART ANK_2a 278 308 IPR002110 GO:0005515
Phac7g03866 477 SMART ANK_2a 313 342 IPR002110 GO:0005515
Phac7g03866 477 FunFam regulatory protein NPR5 isoform X2 244 361 - -
Phac7g03866 477 Pfam Domain of unknown function (DUF3420) 197 255 IPR024228 -
Phac7g03866 477 Pfam Ankyrin repeats (3 copies) 261 343 IPR002110 GO:0005515
Phac7g03866 477 SUPERFAMILY POZ domain 8 160 IPR011333 -
Phac7g03866 477 MobiDBLite consensus disorder prediction 441 477 - -
Phac7g03866 477 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 477 IPR044284 GO:0099402
Phac7g03866 477 CDD BTB_POZ_NPR_plant 8 162 - -
Phac7g03866 477 SUPERFAMILY Ankyrin repeat 272 356 IPR036770 -
Phac7g03866 477 Gene3D - 245 361 IPR036770 -
Phac7g03866 477 ProSiteProfiles Ankyrin repeat profile. 313 345 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03866 Phac-Chr7 39526715 39531946 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Phac7g03866 BTB 5.3e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03866 K14508 - gmx:100811388 783.482