Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03839 ATGCTTAGAGCACGAGCACAATGGAGTGAACAAAATGTGGCAGCTGGTATTGTTTACGCAAGAAAGAAAGTCAGAGTGACGAACTCAGGGTCAGTGTCTAGGGAAAAAAGGCAAGGTGAACACGGTAGATATGGGAAAAGGAAAGATGTTGCTGTCAAGATTCTTAAAGTGCAAGGTTTCGATCCTGGGCGATTTGAAGAATTTCTAAAGGAGGTCTCACTCATGAAGCGCCTTCGGCATCCAAATATTGTACTCTTGATGGGTGCAGTTATTCAACCCCCAAAGTTATCAATAGTAACCGAGTATTTATCTAGAGGCAGTTTGTATGAACTTCTGCACATGCCCAATGTTGGATCATCACTTAGCGAGAGGCGTCGCTTAAGTATGGCTTATGATGTGGCAAGCGGAATGAATTATCTTCATCAAATGAGACCTCCCATTGTTCATAGAGATTTGAAGTCTCCAAATCTTTTGGTTGATGATTCATACACTGTTAAGGTATGTGACTTTGGTCTTTCACGCACAAAGGCAAACACATTTCTTTCGTCTAAAACCGCAGCCGGGACTGTTGTTGCGGCTGTTGGTTTTATGGACAAAAGGCTAGATATTCCAAGGAATGTGAATCCTGAAGTGGCTGCCTTGATTGAGCTCTCTTGGGCCACGGTAATAGCTCAGGCTAAACAAAGTACTTATGAATCGGAAGAGTCTCACACTGGTCTTGGTATAGGCACACAAGCTGGAGAAAGGCAGTATGTGGATGCATGTCTGGCTGTGCGGTGGTCACTAAAGGAGGGTGGTCTAGATCCAGGGGTTGCACTAGAGAAAGGTGGTGGTGGCAAACGGAGGTTGCAGCGTTTTGGGGAACCCTGGAGACGGCCTTCTTTCTCCTATATTATGAAATGTTTGCAGCAAATAATTGCTGATGCTAGAGGGTGA 936 0.4476 MLRARAQWSEQNVAAGIVYARKKVRVTNSGSVSREKRQGEHGRYGKRKDVAVKILKVQGFDPGRFEEFLKEVSLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYELLHMPNVGSSLSERRRLSMAYDVASGMNYLHQMRPPIVHRDLKSPNLLVDDSYTVKVCDFGLSRTKANTFLSSKTAAGTVVAAVGFMDKRLDIPRNVNPEVAALIELSWATVIAQAKQSTYESEESHTGLGIGTQAGERQYVDACLAVRWSLKEGGLDPGVALEKGGGGKRRLQRFGEPWRRPSFSYIMKCLQQIIADARG* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03839 311 SUPERFAMILY Protein kinase-like (PK-like) 42 195 IPR011009 -
Phac7g03839 311 FunFam serine/threonine-protein kinase STY46-like 26 104 - -
Phac7g03839 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Phac7g03839 311 ProSiteProfiles Protein kinase domain profile. 21 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g03839 311 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 41 189 - -
Phac7g03839 311 PIRSF ILK 20 213 - -
Phac7g03839 311 PIRSF ILK 286 310 - -
Phac7g03839 311 Gene3D Transferase(Phosphotransferase) domain 1 12 211 - -
Phac7g03839 311 Pfam Protein tyrosine and serine/threonine kinase 30 179 IPR001245 GO:0004672|GO:0006468
Phac7g03839 311 SMART serkin_6 8 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03839 Phac-Chr7 39286914 39295797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03839 8 221 MAP Kinase Kinase Kinase AT5G03730 53.488 3.64e-75 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phac7g03839 PK_Tyr_Ser-Thr 1.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03839 K14510 - pvu:PHAVU_007G245400g 309.301