Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03834 ATGTCTGATGAATTCTTTGGTAGGGGTGATGAGAGTAGAAAACTGAAACGCAAGATCGAAGAGGCATCTTCTGCTGAAGTTGTGGATTCAGAGTTGTTACTATCCATGAGTCTTGGCAACAACAAAATGGTTGGAGAGTCTTCTTCCATCTGCAAAACTCTGAAAAACCCCATGGATTCACCAAAAGCAGTGGAAAACCCTAATCATCAGATGATTGTGCCTAAGCAGAGGCAATTCCCATGCAAGTTTTGCAGCAAAAAGTTTCCAAGTTCTCAAGCCCTAGGAGGGCATCAGAATGCTCATAGAAGAGAAAGAGTTCTGTCAAGAATAGACAGAGAAATTGACATGGGAACTTTTGGAGTTGGTGTTCACATGTACCCTTACTCCACCATGGCTCATCAACACCCTCTTCGTGGTGCTCCACTACCCTTTTACTATGAGCCTAACATGCACCCTTTGGCTCAGATGTCAACCATGCCATGGCCACTTGCACCACTTCCACCACTTCACAACGCCTCCATTTCAGGGCAACGATTTGGGATGAGCACCACCACAAACCTTGGTGGCATTGAAAATCCACAATACCACAGGGGTTTAGGGTTTGGTTTTGAGCATAACCAAGTTCATCATGCGTTTGATCCCACCAATGGAGCTTCCATGCCTCGTCCAACTCTTGGTGGCCTTATGAGAAACCAGTATAGTGGGAACCAACCATTTTGA 720 0.4542 MSDEFFGRGDESRKLKRKIEEASSAEVVDSELLLSMSLGNNKMVGESSSICKTLKNPMDSPKAVENPNHQMIVPKQRQFPCKFCSKKFPSSQALGGHQNAHRRERVLSRIDREIDMGTFGVGVHMYPYSTMAHQHPLRGAPLPFYYEPNMHPLAQMSTMPWPLAPLPPLHNASISGQRFGMSTTTNLGGIENPQYHRGLGFGFEHNQVHHAFDPTNGASMPRPTLGGLMRNQYSGNQPF* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03834 239 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 26 151 IPR044246 GO:0009788
Phac7g03834 239 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Phac7g03834 239 Pfam C2H2-type zinc finger 79 104 - -
Phac7g03834 239 SUPERFAMILY beta-beta-alpha zinc fingers 76 106 IPR036236 -
Phac7g03834 239 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Phac7g03834 239 Gene3D Classic Zinc Finger 61 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03834 Phac-Chr7 39249686 39250405 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03834 75 163 C2H2 Transcription Factor Family AT5G01860 37.778 5.02e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g03834 zf-C2H2_6 7.7e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03834 - - gmx:102663144 254.218