Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03825 ATGTCAGATGAAGTGTTTGTTGGTGGTGGTGTTGAGAGTAGAAAGTTGAAGCGTAAGATTGAGGAACTTTCATCTATTGATGATGTTGATTTAGAGTTTTCATTATCTTTGAGTCTTGGCAATACAAAAATGGTGGCTGAATCATCATCATCTACTTTCTTTGGTAAATCATTGAAAAACCACAAGAAGACACCAAATTTTGCTTCAAATCCCTCAGAAAACAGCAATCATGAAGTGATAGTGCCTAAGCAATTCCAATTCTCTTGCATGTTTTGCAATAAGAAATTTTCAAGCCCTCAAGCTCTTGGAGGACACCAAAATGCTCATAGGCCTGAAAGAGTGGTCTTAAGGATGGAGAAAGATATGAGAACTTTTGGACATGGCAATCACATGTTCCCACACTCATCCATTCCACATCACTATCCCTTTCAGGGCTCAATACCCCTTTATTCTAGGCATAACATGCACTCCACCATGGCTCATTTCTCAACCATGCCATGGCCTCATTTTGTACCTACCTTTGGCAACCAAGGGTTTCATGACAGATGCATCAGAAGGCAGCAATTTGGGATGAACAACCCTTGGGGAATAGTATCCCAAACTCCAAAAAATTTGTATAGCAGGGATGTGGAATTTGGTTTTAAGCATAACTAA 654 0.3976 MSDEVFVGGGVESRKLKRKIEELSSIDDVDLEFSLSLSLGNTKMVAESSSSTFFGKSLKNHKKTPNFASNPSENSNHEVIVPKQFQFSCMFCNKKFSSPQALGGHQNAHRPERVVLRMEKDMRTFGHGNHMFPHSSIPHHYPFQGSIPLYSRHNMHSTMAHFSTMPWPHFVPTFGNQGFHDRCIRRQQFGMNNPWGIVSQTPKNLYSRDVEFGFKHN* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03825 217 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Phac7g03825 217 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Phac7g03825 217 Gene3D Classic Zinc Finger 72 128 - -
Phac7g03825 217 SUPERFAMILY beta-beta-alpha zinc fingers 86 114 IPR036236 -
Phac7g03825 217 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 47 185 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03825 Phac-Chr7 39189527 39190180 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03825 87 152 C2H2 Transcription Factor Family AT5G57520 45.455 4.45e-10 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g03825 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03825 - - gmx:102663144 274.248