Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03822 ATGGAGTTACCTTCACCAGAGGAACTCATGCCTTTGTCCCAAACCCTAATAACCCCTCATCTTGCCATAGCCTTTCACATAACAAACCCTTCTCACAATCACCACCACCAACAATTTTATTCTTCGCAAGAACCACCGCAATTTCCACTTCAACCACCTTCCGCCGCCGAGGAGGAACCGGCGCGGACGCTCAAGCGGCCGCGGCTGGTGTGGACCCCACAGCTGCACAAGCGCTTCGTGGATGCCGTGGCCCACTTGGGGATCAAGAACGCCGTTCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGCTTGACCCGCGAAAACGTCGCCAGCCACCTCCAGAAATACCGCCTCTACTTGAAGCGCATGCAGGGCTTGGCCGGAGGCTCCGCCGCCGACTCCGCCACCGACCACCTCTTCGCCAGCTCGCCTGTGCCGCCGCACTTTTTGCAAGCCACTGCCCGTTCCACCTCTGACCATTACCTGCCCTTTGTGCCGGCGTTGCAGCAGCACCGCCACCACCAGCAGATGGCGGTGGCCGCACATTTTGGTTCGCCGCGGAATGCGCAGTTTGAGCTACCCATTCTGTCGAGGATTGGCGCTTCGGTGCCGGGTTACGTGGAGGATGTGGAGTCAGGAGGGAGGAAGGTTCTTACTTTGTTTCCACCTGGAGATGATTGA 684 0.5848 MELPSPEELMPLSQTLITPHLAIAFHITNPSHNHHHQQFYSSQEPPQFPLQPPSAAEEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLAGGSAADSATDHLFASSPVPPHFLQATARSTSDHYLPFVPALQQHRHHQQMAVAAHFGSPRNAQFELPILSRIGASVPGYVEDVESGGRKVLTLFPPGDD* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03822 227 MobiDBLite consensus disorder prediction 33 64 - -
Phac7g03822 227 NCBIfam myb-like DNA-binding domain, SHAQKYF class 67 119 IPR006447 GO:0003677
Phac7g03822 227 SUPERFAMILY Homeodomain-like 63 123 IPR009057 -
Phac7g03822 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 122 IPR017930 -
Phac7g03822 227 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 184 IPR044841 GO:0003700|GO:0006355
Phac7g03822 227 FunFam Two-component response regulator 62 125 - -
Phac7g03822 227 Gene3D - 63 125 - -
Phac7g03822 227 Pfam Myb-like DNA-binding domain 70 118 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03822 Phac-Chr7 39169456 39171939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03822 10 227 G2-like Transcription Factor Family AT5G05090 53.252 2.31e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac7g03822 Myb_DNA-binding 1.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03822 - - vra:106771029 377.096