Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03805 ATGGAGAACTCTGATGAGCTCTTTCAGTTCCTCTCAAACACCAATGATTCTTTCTTTCCTGAACCTGCATCATCAATCATGCAACAAAGCTTCTCTTCTTCCTTTTCTTATTACCCTCTTGAACCATTCAATGCACCACCCCATCAAGATAAAGCCCTTGCTGCTTTGAGGAACCACAAAGAGGCTGAGAAGAGAAGAAGGGAAAGAATCAATGTCCACCTCAATAAGCTTCGCACTCTTCTTCCTTGTAACTCCAAGACCGACAAGGCTTCACTCTTGGCTAAGGTGGTGGAAAGGTTGAAGGAGTTGAAGCAGCAGATGTCTGAAATAACCCAATCCGAAACGTTTCCTTCGGAGAGAGACGAGATCTCCGTTCTGTCCACCGGCGGTGACGGGAGTGGCGGTGACGGACGAGTCATATTCAAGGCCTCGTTGTGCTGTGAGGACCGCTCCGACCTCATCCCTGACCTCGTCGAAATTCTCAAGTCTCTTCACCTCACAACGCTCAGAGCCGAAATCGCAACGCTCGGAGGAAGAACCCGCAACGTTCTCGTGGTGGCCACCGACAAAGATCACAGCGTTGAATCAATCCACTTCCTGCAAAACTCGTTGCACACTCTGCTACAACACAACGGCGCATCCAAACGACGCCGTGTCGTAGAACCAAAGTTCGTCGTTTAA 681 0.4934 MENSDELFQFLSNTNDSFFPEPASSIMQQSFSSSFSYYPLEPFNAPPHQDKALAALRNHKEAEKRRRERINVHLNKLRTLLPCNSKTDKASLLAKVVERLKELKQQMSEITQSETFPSERDEISVLSTGGDGSGGDGRVIFKASLCCEDRSDLIPDLVEILKSLHLTTLRAEIATLGGRTRNVLVVATDKDHSVESIHFLQNSLHTLLQHNGASKRRRVVEPKFVV* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03805 226 Coils Coil 93 113 - -
Phac7g03805 226 CDD bHLH_AtAIG1_like 49 125 - -
Phac7g03805 226 SMART finulus 60 109 IPR011598 GO:0046983
Phac7g03805 226 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 54 103 IPR011598 GO:0046983
Phac7g03805 226 CDD ACT_UUR-ACR-like 144 208 - -
Phac7g03805 226 Pfam Helix-loop-helix DNA-binding domain 58 103 IPR011598 GO:0046983
Phac7g03805 226 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 58 116 IPR036638 GO:0046983
Phac7g03805 226 Gene3D - 49 115 IPR036638 GO:0046983
Phac7g03805 226 PANTHER TRANSCRIPTION FACTOR BHLH30 36 221 IPR045847 GO:0003700|GO:0006355
Phac7g03805 226 FunFam transcription factor bHLH30 49 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03805 Phac-Chr7 39024238 39025592 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03805 37 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 66.667 9.62e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g03805 HLH 7.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03805 - K22484 pvu:PHAVU_007G243000g 402.905