Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03781 ATGACAACAGCAGAAGAAACTTCAAACTTGGATCTCATACGCCAACATCTCTTAGGTGAAAACATCTCAAACTCCTCTTTCTGTAAGCTCAATCCTGTCAAGCTTGAAGCCCCCTCATCACCAGAGTTTGATTTCAGCTCATATATTTCAGAAAACACCAGTTTCTTCACTTTCCTTGAAGGCTATGACTTGGTGGCAGACATGGAGTTTGTTGACCACAAGGCCATGAATTCCACATCAACACCAATCATCCCCATCTCCTCTAAGGAACCAAAGAAATGCAATTCTCCTGAACCAATGGTCTCATCAGAAGAGAAGGCAAAGAAGGCAGAATATGATGAGGCAAAACGTTTTAGGGGAGTTAGAAGAAGGCCTTGGGGTAAGTTTGCTGCTGAAATCCGTGACCCTGCAAGGAAAGGGACAAGGGTTTGGCTTGGGACTTTTGACACTGAAATTGATGCTGCTAAGGCCTATGATTGTGCTGCTTTCAAGATGAGGGGTCAGAAGGCCATTCTGAACTTTCCTCTTGAGGCTGGAGAGTCTGATCCAAAGCCAAACAGTTGTGGCAGGAAAAGAAGAAGAGAGAGCCTTGAATTGGAGCTGCCACAGGTCCAAGTTCATCATGGTGTGTCATGA 636 0.4497 MTTAEETSNLDLIRQHLLGENISNSSFCKLNPVKLEAPSSPEFDFSSYISENTSFFTFLEGYDLVADMEFVDHKAMNSTSTPIIPISSKEPKKCNSPEPMVSSEEKAKKAEYDEAKRFRGVRRRPWGKFAAEIRDPARKGTRVWLGTFDTEIDAAKAYDCAAFKMRGQKAILNFPLEAGESDPKPNSCGRKRRRESLELELPQVQVHHGVS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03781 211 Gene3D AP2/ERF domain 116 177 IPR036955 GO:0003700|GO:0006355
Phac7g03781 211 CDD AP2 116 175 IPR001471 GO:0003700|GO:0006355
Phac7g03781 211 FunFam Ethylene-responsive transcription factor 2 116 177 - -
Phac7g03781 211 SMART rav1_2 117 181 IPR001471 GO:0003700|GO:0006355
Phac7g03781 211 PANTHER DNA-BINDING DOMAIN 87 184 IPR044808 GO:0003700|GO:0009873
Phac7g03781 211 MobiDBLite consensus disorder prediction 89 108 - -
Phac7g03781 211 ProSiteProfiles AP2/ERF domain profile. 117 175 IPR001471 GO:0003700|GO:0006355
Phac7g03781 211 SUPERFAMILY DNA-binding domain 117 176 IPR016177 GO:0003677
Phac7g03781 211 MobiDBLite consensus disorder prediction 175 211 - -
Phac7g03781 211 MobiDBLite consensus disorder prediction 184 201 - -
Phac7g03781 211 PRINTS Ethylene responsive element binding protein signature 157 177 IPR001471 GO:0003700|GO:0006355
Phac7g03781 211 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
Phac7g03781 211 Pfam AP2 domain 117 167 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03781 Phac-Chr7 38929653 38930998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03781 1 205 AP2-EREBP Transcription Factor Family AT5G07580 40.455 4.72e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac7g03781 AP2 3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03781 - - ccaj:109813158 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g03781 7 38929653 38930998 Phac7g03781 7 38929653 38930998 ECH