Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac7g03781 | ATGACAACAGCAGAAGAAACTTCAAACTTGGATCTCATACGCCAACATCTCTTAGGTGAAAACATCTCAAACTCCTCTTTCTGTAAGCTCAATCCTGTCAAGCTTGAAGCCCCCTCATCACCAGAGTTTGATTTCAGCTCATATATTTCAGAAAACACCAGTTTCTTCACTTTCCTTGAAGGCTATGACTTGGTGGCAGACATGGAGTTTGTTGACCACAAGGCCATGAATTCCACATCAACACCAATCATCCCCATCTCCTCTAAGGAACCAAAGAAATGCAATTCTCCTGAACCAATGGTCTCATCAGAAGAGAAGGCAAAGAAGGCAGAATATGATGAGGCAAAACGTTTTAGGGGAGTTAGAAGAAGGCCTTGGGGTAAGTTTGCTGCTGAAATCCGTGACCCTGCAAGGAAAGGGACAAGGGTTTGGCTTGGGACTTTTGACACTGAAATTGATGCTGCTAAGGCCTATGATTGTGCTGCTTTCAAGATGAGGGGTCAGAAGGCCATTCTGAACTTTCCTCTTGAGGCTGGAGAGTCTGATCCAAAGCCAAACAGTTGTGGCAGGAAAAGAAGAAGAGAGAGCCTTGAATTGGAGCTGCCACAGGTCCAAGTTCATCATGGTGTGTCATGA | 636 | 0.4497 | MTTAEETSNLDLIRQHLLGENISNSSFCKLNPVKLEAPSSPEFDFSSYISENTSFFTFLEGYDLVADMEFVDHKAMNSTSTPIIPISSKEPKKCNSPEPMVSSEEKAKKAEYDEAKRFRGVRRRPWGKFAAEIRDPARKGTRVWLGTFDTEIDAAKAYDCAAFKMRGQKAILNFPLEAGESDPKPNSCGRKRRRESLELELPQVQVHHGVS* | 212 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac7g03781 | 211 | Gene3D | AP2/ERF domain | 116 | 177 | IPR036955 | GO:0003700|GO:0006355 | |
Phac7g03781 | 211 | CDD | AP2 | 116 | 175 | IPR001471 | GO:0003700|GO:0006355 | |
Phac7g03781 | 211 | FunFam | Ethylene-responsive transcription factor 2 | 116 | 177 | - | - | |
Phac7g03781 | 211 | SMART | rav1_2 | 117 | 181 | IPR001471 | GO:0003700|GO:0006355 | |
Phac7g03781 | 211 | PANTHER | DNA-BINDING DOMAIN | 87 | 184 | IPR044808 | GO:0003700|GO:0009873 | |
Phac7g03781 | 211 | MobiDBLite | consensus disorder prediction | 89 | 108 | - | - | |
Phac7g03781 | 211 | ProSiteProfiles | AP2/ERF domain profile. | 117 | 175 | IPR001471 | GO:0003700|GO:0006355 | |
Phac7g03781 | 211 | SUPERFAMILY | DNA-binding domain | 117 | 176 | IPR016177 | GO:0003677 | |
Phac7g03781 | 211 | MobiDBLite | consensus disorder prediction | 175 | 211 | - | - | |
Phac7g03781 | 211 | MobiDBLite | consensus disorder prediction | 184 | 201 | - | - | |
Phac7g03781 | 211 | PRINTS | Ethylene responsive element binding protein signature | 157 | 177 | IPR001471 | GO:0003700|GO:0006355 | |
Phac7g03781 | 211 | PRINTS | Ethylene responsive element binding protein signature | 118 | 129 | IPR001471 | GO:0003700|GO:0006355 | |
Phac7g03781 | 211 | Pfam | AP2 domain | 117 | 167 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac7g03781 | Phac-Chr7 | 38929653 | 38930998 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac7g03781 | 1 | 205 | AP2-EREBP Transcription Factor Family | AT5G07580 | 40.455 | 4.72e-42 | 139 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Phac7g03781 | AP2 | 3e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac7g03781 | - | - | ccaj:109813158 | 320.472 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phac7g03781 | 7 | 38929653 | 38930998 | Phac7g03781 | 7 | 38929653 | 38930998 | ECH |