Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03780 ATGCAAACCTTTGAACCCAATTTCACCTTTTGCATCCCAAACACCTTAGGGACCTCAATTTCACCATCTGATATTTGCATCACTGATTACTTGCTGCCCCAAGAACTTCAATTTCAAGTTCACATGAGCAATAACAACAACACACAAATGCCTCAAACCACATCTTTCTCCAAGCCTCCAAGATCCTCAAGTCTGAGCAACCGCAAACCCTCCTTGAAAAACATCAAAATCCCTTCCTTAACCTCTGGTCTTGTGATGCCACAGCACATGGAAACAACAGCAAAAACAACATTTGATGCAACCATGTGTAACAACAGCAATCAAGTTTCCTCTTCTTCATCTTTGGATGATGCCAACAATAGCAGAGAGGATAAGCACTATAGAGGGGTTAGGAGAAGGCCGTGGGGGAAGTTTGCTGCAGAAATTCGGGACCCCAATAGAAAAGGGTCAAGGGTGTGGCTTGGAACCTTTGACACAGCCATAGAAGCTGCTAAGGCTTATGACAAAGCTGCTTTCAAGATGAGAGGGAGCAAAGCCATATTGAACTTCCCTTTGGAGGTTGGAGAGTCAGAAGAATCAGTTTCATGCTGCAGCATCAAGGTTGGTGTGAAGAGAGAAAGAGAGGAAGAAAGTGAGTTTATTAGCAATAAGGATAGTAATAAGGTGATGAAGAAAGAAGAGCCCTCTCCCAAAGGGGTGTGCCCTTTGACTCCATCTTGTTGGAAAGGCTTTTGGGACACTGATCTTATGGGAACCATCTTTAGTGTGCCTCCTTTGTCACCATTATCTCCACTAATGGTTGTTTGA 807 0.4374 MQTFEPNFTFCIPNTLGTSISPSDICITDYLLPQELQFQVHMSNNNNTQMPQTTSFSKPPRSSSLSNRKPSLKNIKIPSLTSGLVMPQHMETTAKTTFDATMCNNSNQVSSSSSLDDANNSREDKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDKAAFKMRGSKAILNFPLEVGESEESVSCCSIKVGVKREREEESEFISNKDSNKVMKKEEPSPKGVCPLTPSCWKGFWDTDLMGTIFSVPPLSPLSPLMVV* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03780 268 MobiDBLite consensus disorder prediction 45 71 - -
Phac7g03780 268 SUPERFAMILY DNA-binding domain 126 186 IPR016177 GO:0003677
Phac7g03780 268 Gene3D AP2/ERF domain 125 186 IPR036955 GO:0003700|GO:0006355
Phac7g03780 268 PRINTS Ethylene responsive element binding protein signature 166 186 IPR001471 GO:0003700|GO:0006355
Phac7g03780 268 PRINTS Ethylene responsive element binding protein signature 127 138 IPR001471 GO:0003700|GO:0006355
Phac7g03780 268 SMART rav1_2 126 190 IPR001471 GO:0003700|GO:0006355
Phac7g03780 268 ProSiteProfiles AP2/ERF domain profile. 126 184 IPR001471 GO:0003700|GO:0006355
Phac7g03780 268 PANTHER DNA-BINDING DOMAIN 71 212 IPR044808 GO:0003700|GO:0009873
Phac7g03780 268 CDD AP2 125 184 IPR001471 GO:0003700|GO:0006355
Phac7g03780 268 Pfam AP2 domain 126 176 IPR001471 GO:0003700|GO:0006355
Phac7g03780 268 FunFam Ethylene-responsive transcription factor 2 125 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03780 Phac-Chr7 38923998 38925476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03780 123 261 AP2-EREBP Transcription Factor Family AT5G51190 61.905 3.70e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac7g03780 AP2 4.8e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03780 K09286 - gmx:100795866 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g03780 7 38923998 38925476 Phac7g03780 7 38923998 38925476 ECH
Phac1g02289 1 32610978 32611400 Phac7g03780 7 38923998 38925476 PCT