Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03777 ATGCCAGGCATTCCTGTTGCCGCTCGTGCAACCTCAAGCCACCATGATGCCTGTGAACATTTATCTGCGGAAGAGGAGCTTGCAGCTGAAGAGAGTCTTTCAATTTATTGCAAGCCCGTAGAATTTTACAATATTCTCCAGCGACGTGCCATGAGAAATCCATCATTCCTTCAGAGATGTTTGCACTACCAGATAAAGGAAAAACACAAGAAGAGAATACAAATGACAGTTTCCTTGATGCGAACTATTACGGAAAGCCAAAATGTGTTTCCTATGTCTATCTGTCTTGCAAGGCGGGTTTCTGATTATGGATCTTCAAGGCAATCTGCCGAGTATCGAATCGGTCGAATTTTCATCTTTCGAAACTCCCCTGGAATTGATTTGAATACACAAGTCCAAGCAAATTTTACTCTTCCTGAAGTCAACAAGTTAGCTGACGAAGCTAGATCTTGCTCACTTGATATCTTGTTTGTCAGCACTGCCACTGTGAAAAACTCGAATTTATCATCTGGAGTCAATTCAAACTCTATGCCTTCGGATATGAATCATCTAGCTTTTTTTGAATCTGGAGAGTACTGCCTTTGGGGTAAAGTGTCTTTAGAATCACTTTATATGGCCTGGGATTGTTTTCCGAATTTTCGCTTGGGACAGCGAGCAGAGATTATGTCAACTGTGGATTTGCTTCCATGTATTCTAAAGTCAGATTTTAAAAATGATGACACAAGAGTATCCATTCAAGTTCCTTCTAATTTCGAGAATATGAGTACATCAAAACAAGTACAAATCACAATTTCTGCTGAAGAGTTTGGGGCCAAAGAAAAATCTCCCTATATTTCATATGCAGGCAGTGAAGTACCGTCCTCATCATTGTCTCACTTGATCGGGTTGAGGGAAGGAAATGTCATGTTTAATTACAGGTATTACAATAATAAGTTGCAGAGGACAGAAGTCACCGAAGATTTCACTTGTCCTTTCTGTTTGGTTAAATGTTCTTGTTTTAAGGGTCTAAGATATCATTTGTCCTCATCACATGATCTCTTCAATTTTGAATTTTGGGTATCGGATGAGTGTCATGCCGTAAATGTGACTGTGAAGAATGATATCTCGAGATCAGAGATTGTTGTTGATAATGTTGATCCAAGAGTGCAAACATTTTTCTATTGTGGAAAGCCCCTTAAGCGTAGGACACCAAAGGAACTATCTTCTAAAAATGCAGAAGGCTTAGAGTCTGTCTTTCCTGCAGGAGAAACTGATATTTTGGAGAAGGATGATGGGATTTCTGCCACAATTATTCGATCACATCCTGACCGAGACTCTGTCCAGTCAATGTCAGACTGTGATCAAGCAGTGCTTCAGTTTGCCAAGACTAGGAAGTTGTCAATTGAGTGTTCTGACTCACGAAACAGTGCCCTCTTAAGGAAACGACAGTTTTTTCATTCTCACAAAGCTCAGCCCATGACAATTGAACAAGTTCTATCAGATAAAGATAGTGAAGATGAAGTTGATGATGATGTTGCTGATTTTGAAGATAAAAGGGTATGTTTGGTTTTATTGAATTTTTATTTTATTTTCTAA 1575 0.3917 MPGIPVAARATSSHHDACEHLSAEEELAAEESLSIYCKPVEFYNILQRRAMRNPSFLQRCLHYQIKEKHKKRIQMTVSLMRTITESQNVFPMSICLARRVSDYGSSRQSAEYRIGRIFIFRNSPGIDLNTQVQANFTLPEVNKLADEARSCSLDILFVSTATVKNSNLSSGVNSNSMPSDMNHLAFFESGEYCLWGKVSLESLYMAWDCFPNFRLGQRAEIMSTVDLLPCILKSDFKNDDTRVSIQVPSNFENMSTSKQVQITISAEEFGAKEKSPYISYAGSEVPSSSLSHLIGLREGNVMFNYRYYNNKLQRTEVTEDFTCPFCLVKCSCFKGLRYHLSSSHDLFNFEFWVSDECHAVNVTVKNDISRSEIVVDNVDPRVQTFFYCGKPLKRRTPKELSSKNAEGLESVFPAGETDILEKDDGISATIIRSHPDRDSVQSMSDCDQAVLQFAKTRKLSIECSDSRNSALLRKRQFFHSHKAQPMTIEQVLSDKDSEDEVDDDVADFEDKRVCLVLLNFYFIF* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03777 524 PANTHER POLYCOMB GROUP PROTEIN 20 512 - -
Phac7g03777 524 Pfam VEFS-Box of polycomb protein 459 512 IPR019135 -
Phac7g03777 524 CDD ZnB-Zn_EMF2-like 290 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03777 Phac-Chr7 38898870 38921276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03777 1 513 C2H2 Transcription Factor Family AT5G51230 50.273 8.40e-158 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03777 - - gmx:100798991 908.286