Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03770 ATGGTGATGAAACCAATGACCTGCAATAGGAATAGTGAAGATTGTTTGAGGCTGTTTGGTGTCAACATTGTTGCAAAGAAACCTGTAACTGCTGCTGATACTCAATCTTTAAGCATGGAAAACAACAGCTATTGTCATGGAGAGAAGGAGCTTAATGGGGCCAAAATTTCTAAAGATGAACATTTGTCTGAAGAATTTGATCAACAACTACATGCATATCATGACAACAAGAATACGGGGAAACCATGGACTGAGGAAGAGCACAGGTACTTCTTGTGTGGTTTAAAGAATGTTGGAAAAGGTAACTGGAAAGAGATCTCAAAGAATTATGTGAGGACAAAGACTCCAACACAAGTTGCTAGTCATGCACAAAAGTATTTTCTCAGAATGAGTGCTTTTGAGACAAGAAAACGCAGAAGAAGCCTCTTTGACATACCACTTGTTCGTTTTTACCCTTCACTTTCTCTTTTTTCATCTCTCTTTTCTCTTTATGCACTTCTTTTACTCTATCTATCTTCTGGATATGGCAGGAAGAAGATGCAGCTTCAACAGTTTTTGCAGTCTCCCAAATATAATTCCAACCACATTTTCCTAACTTCTAACTTCTAA 609 0.3777 MVMKPMTCNRNSEDCLRLFGVNIVAKKPVTAADTQSLSMENNSYCHGEKELNGAKISKDEHLSEEFDQQLHAYHDNKNTGKPWTEEEHRYFLCGLKNVGKGNWKEISKNYVRTKTPTQVASHAQKYFLRMSAFETRKRRRSLFDIPLVRFYPSLSLFSSLFSLYALLLLYLSSGYGRKKMQLQQFLQSPKYNSNHIFLTSNF* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03770 202 PANTHER TRANSCRIPTION FACTOR KUA1 9 146 - -
Phac7g03770 202 Pfam Myb-like DNA-binding domain 81 127 IPR001005 -
Phac7g03770 202 ProSiteProfiles Myb-like domain profile. 82 127 IPR001005 -
Phac7g03770 202 FunFam transcription factor MYB1R1 81 132 - -
Phac7g03770 202 Gene3D - 81 133 - -
Phac7g03770 202 ProSiteProfiles SANT domain profile. 78 131 IPR017884 -
Phac7g03770 202 CDD SANT 82 127 IPR001005 -
Phac7g03770 202 NCBIfam myb-like DNA-binding domain, SHAQKYF class 81 129 IPR006447 GO:0003677
Phac7g03770 202 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 131 IPR017930 -
Phac7g03770 202 SUPERFAMILY Homeodomain-like 77 131 IPR009057 -
Phac7g03770 202 SMART sant 79 129 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03770 Phac-Chr7 38862773 38866150 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac7g03770 Myb_DNA-binding 1.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03770 - - pvu:PHAVU_007G241200g 214.157