Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03765 ATGGATGCTTCAAAGACCTATAGGAAAAGGCATGAAGATTGCTCCAGTAGCACTTCGTCTGGCAAAGAATTGAGGGAAGTGCTTTTGAAACGCAGGAAGGTGAATCGAGCATTGGTGACATTTAGGAACTTGTTTGAGAAGCTAATGCATGAATACAAAGTGTACGAACCTGGGAATTCTAAGGTTAAGACAAAAGCTCTGATGGAGGCAGCAAGGACAATGAGAAGAGAACATCAATGGGAAAACACTCAAAAGTGTGTGGGGCATATACTAGGAATCGATGTCGGTGATGTCTTTCAGAACTGGGTTGAACTCAATGTCATTGGTCTCCATAGACAATTTTGGAATGGGATTGATTATAAGGTAATGGGCAATAGTTTGTTGGCCACAAGCATTGTAGTAACGGATCGCTATGATAATGCTATGAAATCTAATGGTACCTTGGTTTATGAAGGTCAAGGAGGAAATCCTAATGTTGGGAGAAATATTTCACTTATTGATCAAAAATTGGAAGGAGGAAATTTGGCCCTGAAAAATAGCATGCAAACTAGAAGTCCCGTGAGGGTTATATTGAAAGTTTGTGGAAAGTTTGATGGTGAGTTCAGTAACACTGGCAACAATTCTCATTACTCATATGTGTATGATGGTTTGTATTTGGTGGATACAACGAAAATAGAAAGAGGCAGATATGGAAAGCTTGTGTTCAAGTTTGCACTAAATAGAATTTTAGGACAACCCCAAACTTGTGTTGCCCTTAAGGGCCATGGCCAAAACTCAAGGCAACTTGCAAGTTTTACTCCTAGGAAGAAACACAAACTGAAAAGTGGTGTAGCTCAAAAGGAGGTTGTTCGCATTAAAGATCTTTCAAATGGTGGCGAGAAGTTTAGTGTTAGGGTGGTGACTTCAAGTGATTGTGTTCAGCTACCCTCATCCTTTGATTACGTTGTAAATAACATTTACTCAAACAAGTTCAAGCAGGCAATTCTCCGTGGCTGTGATTGTGCAGACGGGTGTGTTGACAAAGAAAGTTGTGTCTGCTTCAGGAAGAATGGTAGCAAAATGCCGAATGATTGTAATAAAAGACTTGCTTCTGACCTGGAATCATCATTTATATATGAGTGTGGCCCATCTTGCAAGTGCTCCTCTTCTTGCATCAACCGAGTCACTCAGCATGGCATTAAGTTTCAACTTGAAATCTTCATGACAGAACTGAAAGGTTGGGGTGTTAGAACACGCTCTTTCATTCCCTCTGGAAGCTTTGTATGTGAGTATATTGGAGAAGTGAGTGACTATATGGAGGCTAGATGGAGGCTAGATGATGACTATACATTTCACATGGGTGTTGGAAAGGTCTTCATTAATGCAAGTAAACATGGAAACGTTGGAAGATTTATAAATCATAGTTGTTCTCCAAATCTATGTGTCAAAGATGTTATGTATGATCACAATGACAAGAGTCTTCCTCACAAAATGCTGTTTGCTATAAGGGATATTGCTGCTGGTAGAGAGCTGACTTATGATTACAATGCCTCTAATGGAAAATTGATTAAGTGTAGGAGTAATACCTGCTACTGTGGAACTCGTGAATGCAATGGACAGATCTACATTTAA 1611 0.3973 MDASKTYRKRHEDCSSSTSSGKELREVLLKRRKVNRALVTFRNLFEKLMHEYKVYEPGNSKVKTKALMEAARTMRREHQWENTQKCVGHILGIDVGDVFQNWVELNVIGLHRQFWNGIDYKVMGNSLLATSIVVTDRYDNAMKSNGTLVYEGQGGNPNVGRNISLIDQKLEGGNLALKNSMQTRSPVRVILKVCGKFDGEFSNTGNNSHYSYVYDGLYLVDTTKIERGRYGKLVFKFALNRILGQPQTCVALKGHGQNSRQLASFTPRKKHKLKSGVAQKEVVRIKDLSNGGEKFSVRVVTSSDCVQLPSSFDYVVNNIYSNKFKQAILRGCDCADGCVDKESCVCFRKNGSKMPNDCNKRLASDLESSFIYECGPSCKCSSSCINRVTQHGIKFQLEIFMTELKGWGVRTRSFIPSGSFVCEYIGEVSDYMEARWRLDDDYTFHMGVGKVFINASKHGNVGRFINHSCSPNLCVKDVMYDHNDKSLPHKMLFAIRDIAAGRELTYDYNASNGKLIKCRSNTCYCGTRECNGQIYI* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03765 536 ProSiteProfiles YDG domain profile. 88 241 IPR003105 -
Phac7g03765 536 ProSiteProfiles Pre-SET domain profile. 330 392 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac7g03765 536 SUPERFAMILY SET domain 277 517 IPR046341 -
Phac7g03765 536 Pfam SET domain 406 509 IPR001214 GO:0005515
Phac7g03765 536 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 29 528 - -
Phac7g03765 536 Gene3D SET domain 277 535 IPR046341 -
Phac7g03765 536 Gene3D - 69 267 IPR036987 -
Phac7g03765 536 ProSiteProfiles SET domain profile. 395 509 IPR001214 GO:0005515
Phac7g03765 536 SMART set_7 395 515 IPR001214 GO:0005515
Phac7g03765 536 ProSiteProfiles Post-SET domain profile. 519 535 IPR003616 -
Phac7g03765 536 SMART preset_2 285 379 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac7g03765 536 Pfam SAD/SRA domain 87 245 IPR003105 -
Phac7g03765 536 SUPERFAMILY PUA domain-like 70 251 IPR015947 -
Phac7g03765 536 SMART G9a_1 83 245 IPR003105 -
Phac7g03765 536 Pfam Pre-SET motif 289 387 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03765 Phac-Chr7 38843344 38845842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03765 66 534 Su(var)3-9 homologs AT1G73100 35.616 4.34e-82 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac7g03765 SAD_SRA 2e-37 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03765 - - vun:114192587 892.493