Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03742 ATGGCTATGTTTGATCTCAATGTTGACATCAACCATGCTGATGCTGATGCTGGCTCAAGCTGTACTCAAAAGGGGGCGAAACTGCAAAATTTTCCACCTGAAATCTCAGATTCCAGGACCTCCAACTCCTCTGTGTGGAATCCTGCAGATGAAGATTCCTCAAACAATTCCTCTCCCTTGATTTTTGACATACTGAAGAAAGAGAGGGGTGGCTCAGAGTTTGATGCTGCCACTGAAGGCAACAAGGAGCAAAACATGGCACAAAAGGGTGAGATGGTGACAAGGACCCTTTTCCCCGTGACTTCTTCTGATAAAGGAGGAAGAGTGCCTGATTTCAAATCGGGGTTGTGGGAGAAGACTCAGTTGTTGAACCTGTCCTTTCCTGAGCCTGATGGACAAAATGGACTGAGAACCTTACAGCAGAAGCTACCTCATGTGAGGAAAAATAGGAGAGGACCAAGGTCTCGCAGCTCGCAATACCGGGGTGTCACCTTCTACCGCAGGACTGGTAGATGGGAATCACATATTTGGGATTGTGGGAAGCAGGTCTATCTGGGTGGATTTGACACTGCTCAAGCTGCTGCAAGTGCGTACGATAGGGCTGCTATTAAGTTTCGTGGAGTAGATGCTGATATAAACTTTAGTTTGAGAGATTATGAGGAGGATTTGAAGCAGATGAGAGCTTTGAGTAAGGAAGAGTTTGTGCTGGTACTTCGTCGACAAATCAATGGAATCTCGAGGAGAAGTACAACATACAGAGGTTCATTAGCTCTTCACAAAGGTGGTCAAGGAGAACCAAGAATGGGACCATTTCTTGGCAAGACATTTTGTCCCAAGTCTTCCGAAGGAAAAGTGGAGGCCAGTTTTAGACCTTTTTCCTATAAGGAAAACATAATTGCAAATTCCAGTATAGCAGGCACTTGCCATAATCTTGATTTGAGCCTGGGAATTTCTCCATCTTCTAAAAAGTTGAAGAATTGTGATTTTGGTGGAGAGTACTCCTTTGGATGTATGGCTTCTAAGATACCTGAGGAAATAGGAACAATGGTACTACTATTTGCTTCCCTTTTTGTTGCAATATTTTTTTGA 1089 0.4399 MAMFDLNVDINHADADAGSSCTQKGAKLQNFPPEISDSRTSNSSVWNPADEDSSNNSSPLIFDILKKERGGSEFDAATEGNKEQNMAQKGEMVTRTLFPVTSSDKGGRVPDFKSGLWEKTQLLNLSFPEPDGQNGLRTLQQKLPHVRKNRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAASAYDRAAIKFRGVDADINFSLRDYEEDLKQMRALSKEEFVLVLRRQINGISRRSTTYRGSLALHKGGQGEPRMGPFLGKTFCPKSSEGKVEASFRPFSYKENIIANSSIAGTCHNLDLSLGISPSSKKLKNCDFGGEYSFGCMASKIPEEIGTMVLLFASLFVAIFF* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03742 362 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 84 274 - -
Phac7g03742 362 FunFam AP2-like ethylene-responsive transcription factor 158 217 - -
Phac7g03742 362 CDD AP2 158 214 IPR001471 GO:0003700|GO:0006355
Phac7g03742 362 Pfam AP2 domain 159 207 IPR001471 GO:0003700|GO:0006355
Phac7g03742 362 Gene3D AP2/ERF domain 158 217 IPR036955 GO:0003700|GO:0006355
Phac7g03742 362 SMART rav1_2 159 221 IPR001471 GO:0003700|GO:0006355
Phac7g03742 362 ProSiteProfiles AP2/ERF domain profile. 159 215 IPR001471 GO:0003700|GO:0006355
Phac7g03742 362 SUPERFAMILY DNA-binding domain 158 216 IPR016177 GO:0003677
Phac7g03742 362 MobiDBLite consensus disorder prediction 15 58 - -
Phac7g03742 362 MobiDBLite consensus disorder prediction 16 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03742 Phac-Chr7 38794251 38798631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03742 3 274 AP2-EREBP Transcription Factor Family AT2G28550 52.297 7.69e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac7g03742 AP2 1.5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03742 K09284 - gmx:100776138 560.836