Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03704 ATGGCGCTGCTTTCTTCTTCTTCTTCTTCTTCTGCCAAGTGGGTCCTCTTCTTCCTTCTCGCCTTCTTCGTTCAGCTACAAGCCATGCCCACCACCACACCACAGATCTCTCACCTCAGGAATGTTGAAGTGGAAAAACACAGGTTCCCGAGCTTGCAGAACTCGTCAATGGCTGAGAGGGCAAAAGAGGCTGAGAAATTAAATGAAGAAGCTGCAGTGGCTAACCCAGAGGAAGTGGTTTCAATGGTTGAGATGAGCATCCAGAATAGTACACAGAGAAGGAATCTGGGGTTTTTCTCCTGTGGAACTGGTAACCCCATTGATGATTGCTGGCGTTGTGACCCCAACTGGCAACGCAACAGGAAGCGTCTTGCAGATTGTGGCATTGGTTTTGGTAGAAATGCCATTGGTGGTCGTGATGGCAAGTACTATGTTGTGACTGATCCCAGGGATGATGACCCTGTGAACCCCAAACCTGGCACTCTTCGCCATGCTGTGATCCAGGACAGGCCCTTGTGGATTGTGTTCAAGAGGGACATGGTTATTCAGTTGAAGCAAGAGCTAATCATGAACAGCTTCAAGACCATTGATGGAAGGGGAGCCAATGTGCACATTGCTAATGGGGCATGTATCACAATCCAGTTTATTACCAACGTCATCATCCATGGCCTGCATATTCATGATTGCGTACCTACGGGAAATGCCATGGTGAGGAGCTCCCCCACCCACTTTGGTTGGAGGACAATGGCTGATGGAGATGCCATCTCCATATTTAGCTCAAGCCACATTTGGGTTGACCACAACTCCTTGTCCCACTGTGCTGATGGCCTTGTGGATGCTGTCTTGGGCTCAACAGCCATAACTATTTCAAACAACCACTTCACCCACCACAACGAGGTGATTCTGCTGGGCCACAGTGACTCTTACACAAGAGACAAGCTCATGCAAGTGACCATCGCATACAACCATTTCGGAGAGGGACTAATCCAGAGAATGCCACGGTGTAGACATGGATATTTTCACGTGGTGAACAATGACTACACTCACTGGGAAATGTATGCTATTGGTGGAAGTGCTAACCCCACCATTAACAGCCAGGGCAACCGATACAATGCTCCTGTTAACCCTTTTGCCAAGGAGGTGACTAAGAGAGTGGAGACAGCACAAACTCAGTGGAAGGGTTGGAATTGGAGGTCTGAGGGAGATTTGTTGCTGAATGGTGCCTATTTCACCCCTTCAGGAGCTGGAGCCTCAGCCAGCTATGCCAGGGCCTCAAGCTTAGGAGCCAAATCATCTTCCATGGTTGGTTCCATGACTTCCAATGCTGGTGCACTCGGTTGCAAAAGAGGCCGTCAGTGCTAG 1362 0.4934 MALLSSSSSSSAKWVLFFLLAFFVQLQAMPTTTPQISHLRNVEVEKHRFPSLQNSSMAERAKEAEKLNEEAAVANPEEVVSMVEMSIQNSTQRRNLGFFSCGTGNPIDDCWRCDPNWQRNRKRLADCGIGFGRNAIGGRDGKYYVVTDPRDDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIMNSFKTIDGRGANVHIANGACITIQFITNVIIHGLHIHDCVPTGNAMVRSSPTHFGWRTMADGDAISIFSSSHIWVDHNSLSHCADGLVDAVLGSTAITISNNHFTHHNEVILLGHSDSYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPVNPFAKEVTKRVETAQTQWKGWNWRSEGDLLLNGAYFTPSGAGASASYARASSLGAKSSSMVGSMTSNAGALGCKRGRQC* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03704 453 Gene3D - 104 446 IPR012334 -
Phac7g03704 453 Pfam Pectate lyase 186 368 IPR002022 -
Phac7g03704 453 SMART amb_all 179 376 IPR002022 -
Phac7g03704 453 FunFam Pectate lyase 104 446 - -
Phac7g03704 453 PRINTS Pollen allergen Amb family signature 353 372 IPR018082 -
Phac7g03704 453 PRINTS Pollen allergen Amb family signature 424 447 IPR018082 -
Phac7g03704 453 PRINTS Pollen allergen Amb family signature 251 272 IPR018082 -
Phac7g03704 453 PRINTS Pollen allergen Amb family signature 127 144 IPR018082 -
Phac7g03704 453 PRINTS Pollen allergen Amb family signature 151 176 IPR018082 -
Phac7g03704 453 PRINTS Pollen allergen Amb family signature 331 350 IPR018082 -
Phac7g03704 453 PRINTS Pollen allergen Amb family signature 187 203 IPR018082 -
Phac7g03704 453 PRINTS Pollen allergen Amb family signature 395 419 IPR018082 -
Phac7g03704 453 PANTHER PECTATE LYASE 18-RELATED 66 451 IPR045032 GO:0030570
Phac7g03704 453 SUPERFAMILY Pectin lyase-like 80 447 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03704 Phac-Chr7 38510763 38516479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03704 35 453 Polysaccharide Lyase AT4G13710 79.245 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03704 K01728 - gmx:100781845 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g03704 7 38510763 38516479 Phac7g03704 7 38510763 38516479 ECH