Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03699 ATGGCAGAAGATATGAAAATTGATCAAATTGTGGAAGTTCCTGATACCCCAGATAGAATAACTGTGAGGGGTGATGATCAGAAACGTTTATGTAATCCTGAGAAGAGGGGCAGAGCTCTTAATGCTGCAGTTGAAATGAATAATAGTACCTGTACCACATCATCCCCCTCAGAGAAATCTTATCCTTCTCAAAATGCTCCCATCTTTAGGAGAGGCCAAACAAAACATTCTAATGGAGCTGAAAAGATGGAGAAAGGGAAAACTATTAGCTCCAAGGTTTCCTCTAAATCATCTCGCCGTGGTATTTCTGTTTTAGATTTGACTGAAGAGAATGGAGCAAGCCAACAACTGAAACCAGCTTTCTCACTTGGTGCATCAAGAGATCATGCAACTGAAGCCAAGAAAGCAACCAAAGCAACTATTGGGAACTCTTTGTTGCCAGCCATTTCGGATTCTTCTGTTACATCTAGAAATCCCTTCACTGGAAACTGTAAACTTCCAGGTTCTAATACATCTGTGGACCGTGGCAAGGGTATTTCTCTGTCTCGTGATTCTCAATCCCAAAATGAAAAGCAAGTGTCTTTGCCTCCATTTGTTTCCACCTCTCCACAAGGTAGAGGGCACAAGAGATTGGTGCGAAATGGGTGCATTTTACCTATTAATATTGCAACGAGGGCCAAACAATTAGCTGAACAGAGAAACCTTCAAACTGAAGATGTTCAACAGAGCCACGCTGATCATGTGCTTTCTAGCAATACAGTGTCACCAAATAGTGTTGATGACATAGTTGCTAGAGAGAGAGGCAATGGTAGAGGTAAAGGAAAGGAAGTACTTATTCCTCCTCCATTCAATGGACGCAATGCTGGAACCTTTTGCACTGCTAGCAGCAGCCCTGTCATCAATCATGAAGAGGTCACTGGTACCAGTAATGATACAATAAATTCACTTCAATACTCTGGGGGACAAGGTGGTTGGAGAACTACTCATAATGAGAGGAATGCTAATCAGCACTTGTATGATGTACATGGGCATCCTAGAAATAATGGTGTTGGAAGATGTTTTAATAGGCGGAATACATACCTAGTGAATGGAAGAAACATTGGGAGTGATCAAAGCTGCACACGTGTACATGGTTCTCAATCAGATCGTACAGCTCAACCAATTTCTGTGATTATTCCAGATGTGGAACAGCTGTCTGTTAACCGTCCTACTGCTGACATTCTGAGTAAAAGGCAAAGGAAACGTGAATCACCTGGGGAATCATCAAGTTCATATCCGGAAGTGGTAGAGTTGTTATCAACACCAAGGAACTCAGCAAGCTCATCCCGGAGCCGTGTCTTGGATCCTGAAGTGGTTGAGTTGATGTCCACACCAAGGTACAAATCATCTGAAGATTTAGATGATAATGACAATAATAGCTTGGAAGCTCGGGCCAGACAAGTGGAAGCAGATGAGATATTGGCACGAGAACTCCAAGAACAATTGTATCATGATGATTCTATTGAAGACAGAGGGATTGATGAACATTTAGCGTGGGAGTTGCAGCATGCAGAGGATAGTCTGCCTACATCCATTGATAGCCACAGCAGAAATCATCCTGTACGTTTTCCTAGGGCAAACAGACAGCCTCGTATATTGCCTAATCAGAGTTCTTCCAGAAGGAGACCTGAGCCTCTAGCTTTCTCTAATAGAATGGCACGGTTGAGGAGTCGCGCCACAAGTAGGACTCGGGCATCTAACATGTCATCTAGAGGAAGAAGCCCCCAGTTTCCTCTGGATATGGACTTGGACATGAGACTTGATATATTAGAAGCTTTGGAGAATTCAATGGGGGATTTCAGTGATATGGGAATGGTTGATGGCATCTTTAATGCGGGACGTGATTTCAACGCAAGTGATTATGAAATGTTATTGGCCCTTGATGAGAGAAATCATCAACATACTGGTGCATCTACTAATCTGATCAATAGCCTTCCGCAGTTAACAATCCAGAATGACAACATGACAGAGCCATGTGCTATATGTCTTGAGACCCCAGCCAGGGGAGAAACTATTCGCCACCTTCCCTGTTTGCACAAATTTCACAAAGATTGTATCGATCCTTGGCTCCAGAGGAAAACAACATGCCCCGTGTGCAAGTCATCAATCACCTAA 2154 0.4313 MAEDMKIDQIVEVPDTPDRITVRGDDQKRLCNPEKRGRALNAAVEMNNSTCTTSSPSEKSYPSQNAPIFRRGQTKHSNGAEKMEKGKTISSKVSSKSSRRGISVLDLTEENGASQQLKPAFSLGASRDHATEAKKATKATIGNSLLPAISDSSVTSRNPFTGNCKLPGSNTSVDRGKGISLSRDSQSQNEKQVSLPPFVSTSPQGRGHKRLVRNGCILPINIATRAKQLAEQRNLQTEDVQQSHADHVLSSNTVSPNSVDDIVARERGNGRGKGKEVLIPPPFNGRNAGTFCTASSSPVINHEEVTGTSNDTINSLQYSGGQGGWRTTHNERNANQHLYDVHGHPRNNGVGRCFNRRNTYLVNGRNIGSDQSCTRVHGSQSDRTAQPISVIIPDVEQLSVNRPTADILSKRQRKRESPGESSSSYPEVVELLSTPRNSASSSRSRVLDPEVVELMSTPRYKSSEDLDDNDNNSLEARARQVEADEILARELQEQLYHDDSIEDRGIDEHLAWELQHAEDSLPTSIDSHSRNHPVRFPRANRQPRILPNQSSSRRRPEPLAFSNRMARLRSRATSRTRASNMSSRGRSPQFPLDMDLDMRLDILEALENSMGDFSDMGMVDGIFNAGRDFNASDYEMLLALDERNHQHTGASTNLINSLPQLTIQNDNMTEPCAICLETPARGETIRHLPCLHKFHKDCIDPWLQRKTTCPVCKSSIT* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03699 717 PANTHER SI:CH211-59O9.10 548 717 - -
Phac7g03699 717 MobiDBLite consensus disorder prediction 149 209 - -
Phac7g03699 717 MobiDBLite consensus disorder prediction 543 557 - -
Phac7g03699 717 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 638 717 IPR013083 -
Phac7g03699 717 MobiDBLite consensus disorder prediction 48 100 - -
Phac7g03699 717 MobiDBLite consensus disorder prediction 521 590 - -
Phac7g03699 717 MobiDBLite consensus disorder prediction 235 258 - -
Phac7g03699 717 MobiDBLite consensus disorder prediction 48 72 - -
Phac7g03699 717 Pfam Ring finger domain 672 713 IPR001841 -
Phac7g03699 717 SMART ring_2 672 712 IPR001841 -
Phac7g03699 717 FunFam RING/U-box superfamily protein 637 717 - -
Phac7g03699 717 CDD RING-H2_PA-TM-RING 671 713 - -
Phac7g03699 717 MobiDBLite consensus disorder prediction 75 89 - -
Phac7g03699 717 SUPERFAMILY RING/U-box 655 716 - -
Phac7g03699 717 MobiDBLite consensus disorder prediction 567 587 - -
Phac7g03699 717 ProSiteProfiles Zinc finger RING-type profile. 672 713 IPR001841 -
Phac7g03699 717 MobiDBLite consensus disorder prediction 149 201 - -
Phac7g03699 717 MobiDBLite consensus disorder prediction 403 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03699 Phac-Chr7 38444477 38451434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03699 3 717 C3H Transcription Factor Family AT1G04790 32.172 3.46e-70 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03699 - - gmx:100796218 884.404