Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03698 ATGTGGATAAAGTACCCCTTATATGTTTTCTATGTGTGGTGCAAGCTCAAAATTTTTTCGTTGTCTGTTCTACATGATGAAATTCATTATATTGCATTTTTTTACAGAATATTTGGTGTGCCATATGTACTTGGAGCATTTTTTTATGACCTGCTTTACTACTTTTTGTTAGATGCCCAGAAGACAATTTGTGCTGACGATGTCCAATATTTTTCTATGCTTTGGTTCATATTGTTCCAGGATATGGCAGAAGATATGAAAATTGATCAAATTGTGGAAGTTCCTGATACCCCAGATAGAATAACTGTGAGGGGTGATGATCAGAAACGTTTATGTAATCCTGAGAAGAGGGGCAGAGCTCTTAATGCTGCAGTTGAAATGAATAATAGTACCTGTACCACATCATCCCCCTCAGAGAAATCTTATCCTTCTCAAAATGCTCCCATCTTTAGGAGAGGCCAAACAAAACATTCTAATGGAGCTGAAAAGATGGAGAAAGGGAAAACTATTAGCTCCAAGGTTTCCTCTAAATCATCTCGCCGTGGTATTTCTGTTTTAGATTTGACTGAAGAGAATGGAGCAAGCCAACAACTGAAACCAGCTTTCTCACTTGGTGCATCAAGAGATCATGCAACTGAAGCCAAGAAAGCAACCAAAGCAACTATTGGGAACTCTTTGTTGCCAGCCATTTCGGATTCTTCTGTTACATCTAGAAATCCCTTCACTGGAAACTGTAAACTTCCAGGTTCTAATACATCTGTGGACCGTGGCAAGGGTATTTCTCTGTCTCGTGATTCTCAATCCCAAAATGAAAAGCAAGTGTCTTTGCCTCCATTTGTTTCCACCTCTCCACAAGGTAGAGGGCACAAGAGATTGGTGCGAAATGGGTGCATTTTACCTATTAATATTGCAACGAGGGCCAAACAATTAGCTGAACAGAGAAACCTTCAAACTGAAGATGTTCAACAGAGCCACGCTGATCATGTGCTTTCTAGCAATACAGTGTCACCAAATAGTGTTGATGACATAGTTGCTAGAGAGAGAGGCAATGGTAGAGGTAAAGGAAAGGAAGTACTTATTCCTCCTCCATTCAATGGACGCAATGCTGGAACCTTTTGCACTGCTAGCAGCAGCCCTGTCATCAATCATGAAGAGGTCACTGGTACCAGTAATGATACAATAAATTCACTTCAATACTCTGGGGGACAAGGTGGTTGGAGAACTACTCATAATGAGAGGAATGCTAATCAGCACTTGTATGATGTACATGGGCATCCTAGAAATAATGGTGTTGGAAGATGTTTTAATAGGCGGAATACATACCTAGTGAATGGAAGAAACATTGGGAGTGATCAAAGCTGCACACGTGTACATGGTTCTCAATCAGATCGTACAGCTCAACCAATTTCTGTGATTATTCCAGATGTGGAACAGCTGTCTGTTAACCGTCCTACTGCTGACATTCTGAGTAAAAGGCAAAGGAAACGTGAATCACCTGGGGAATCATCAAGTTCATATCCGGAAGTGGTAGAGTTGTTATCAACACCAAGGAACTCAGCAAGCTCATCCCGGAGCCGTGTCTTGGATCCTGAAGTGGTTGAGTTGATGTCCACACCAAGGTACAAATCATCTGAAGATTTAGATGATAATGACAATAATAGCTTGGAAGCTCGGGCCAGACAAGTGGAAGCAGATGAGATATTGGCACGAGAACTCCAAGAACAATTGTATCATGATGATTCTATTGAAGACAGAGGGATTGATGAACATTTAGCGTGGGAGTTGCAGCATGCAGAGGATAGTCTGCCTACATCCATTGATAGCCACAGCAGAAATCATCCTGTACGTTTTCCTAGGGCAAACAGACAGCCTCGTATATTGCCTAATCAGAGTTCTTCCAGAAGGAGACCTGAGCCTCTAGCTTTCTCTAATAGAATGGCACGGTTGAGGAGTCGCGCCACAAGTAGGACTCGGGCATCTAACATGTCATCTAGAGGAAGAAGCCCCCAGTTTCCTCTGGATATGGACTTGGACATGAGACTTGATATATTAGAAGCTTTGGAGAATTCAATGGGGGATTTCAGTGATATGGGAATGGTTGATGGCATCTTTAATGCGGGACGTGATTTCAACGCAAGTGATTATGAAATGTTATTGGCCCTTGATGAGAGAAATCATCAACATACTGGTGCATCTACTAATCTGATCAATAGCCTTCCGCAGTTAACAATCCAGAATGACAACATGACAGAGCCATGTGCTATATGTCTTGAGACCCCAGCCAGGGGAGAAACTATTCGCCACCTTCCCTGTTTGCACAAATTTCACAAAGATTGTATCGATCCTTGGCTCCAGAGGAAAACAACATGCCCCGTGTGCAAGTCATCAATCACCTAA 2397 0.4214 MWIKYPLYVFYVWCKLKIFSLSVLHDEIHYIAFFYRIFGVPYVLGAFFYDLLYYFLLDAQKTICADDVQYFSMLWFILFQDMAEDMKIDQIVEVPDTPDRITVRGDDQKRLCNPEKRGRALNAAVEMNNSTCTTSSPSEKSYPSQNAPIFRRGQTKHSNGAEKMEKGKTISSKVSSKSSRRGISVLDLTEENGASQQLKPAFSLGASRDHATEAKKATKATIGNSLLPAISDSSVTSRNPFTGNCKLPGSNTSVDRGKGISLSRDSQSQNEKQVSLPPFVSTSPQGRGHKRLVRNGCILPINIATRAKQLAEQRNLQTEDVQQSHADHVLSSNTVSPNSVDDIVARERGNGRGKGKEVLIPPPFNGRNAGTFCTASSSPVINHEEVTGTSNDTINSLQYSGGQGGWRTTHNERNANQHLYDVHGHPRNNGVGRCFNRRNTYLVNGRNIGSDQSCTRVHGSQSDRTAQPISVIIPDVEQLSVNRPTADILSKRQRKRESPGESSSSYPEVVELLSTPRNSASSSRSRVLDPEVVELMSTPRYKSSEDLDDNDNNSLEARARQVEADEILARELQEQLYHDDSIEDRGIDEHLAWELQHAEDSLPTSIDSHSRNHPVRFPRANRQPRILPNQSSSRRRPEPLAFSNRMARLRSRATSRTRASNMSSRGRSPQFPLDMDLDMRLDILEALENSMGDFSDMGMVDGIFNAGRDFNASDYEMLLALDERNHQHTGASTNLINSLPQLTIQNDNMTEPCAICLETPARGETIRHLPCLHKFHKDCIDPWLQRKTTCPVCKSSIT* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03698 798 MobiDBLite consensus disorder prediction 602 671 - -
Phac7g03698 798 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 719 798 IPR013083 -
Phac7g03698 798 MobiDBLite consensus disorder prediction 449 469 - -
Phac7g03698 798 Pfam Ring finger domain 753 794 IPR001841 -
Phac7g03698 798 MobiDBLite consensus disorder prediction 624 638 - -
Phac7g03698 798 SMART ring_2 753 793 IPR001841 -
Phac7g03698 798 MobiDBLite consensus disorder prediction 484 508 - -
Phac7g03698 798 MobiDBLite consensus disorder prediction 156 170 - -
Phac7g03698 798 MobiDBLite consensus disorder prediction 129 183 - -
Phac7g03698 798 MobiDBLite consensus disorder prediction 316 339 - -
Phac7g03698 798 MobiDBLite consensus disorder prediction 648 668 - -
Phac7g03698 798 MobiDBLite consensus disorder prediction 230 282 - -
Phac7g03698 798 MobiDBLite consensus disorder prediction 449 468 - -
Phac7g03698 798 MobiDBLite consensus disorder prediction 129 153 - -
Phac7g03698 798 ProSiteProfiles Zinc finger RING-type profile. 753 794 IPR001841 -
Phac7g03698 798 PANTHER SI:CH211-59O9.10 629 798 - -
Phac7g03698 798 FunFam RING/U-box superfamily protein 718 798 - -
Phac7g03698 798 SUPERFAMILY RING/U-box 737 797 - -
Phac7g03698 798 CDD RING-H2_PA-TM-RING 752 794 - -
Phac7g03698 798 MobiDBLite consensus disorder prediction 230 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03698 Phac-Chr7 38444477 38451434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03698 84 798 C3H Transcription Factor Family AT1G04790 32.172 1.93e-69 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03698 - - gmx:100796218 884.404