Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03618 ATGTATTGGGGGGAAGTTTTGGGTGGCCATATGGGTAGGGGTGTGATGGAGGAGGAGGTATGGAGGAAGGGACCTTGGACTGCTGAAGAAGACAGATTGCTTGTTGAGTATGTCAGGTTGCATGGTGAAGGAAGATGGAACTCTGTTTCTAGGCTTGCAGGATTGAAAAGAAATGGGAAGAGCTGCAGATTGAGGTGGGTGAATTATCTGAGGCCTGACCTCAAGAGGGGACAGATAACACCACAAGAAGAGAGCATAATTGTAGAGTTGCATGCTAGATGGGGAAACAGGTGGTCAACAATTGCAAGGAGTCTACCAGGGAGAACTGACAATGAGATAAAAAACTATTGGAGGACTCATTTCAAGAAAAAGGCTAAAAGTCCCTCTGATGCAGCCGAGAAGGCAAGAAATAGGCTCCTGAGGAAGCAGCAATTTCAGCAGCAACAACAGCAACAGTTGCAGCAGCAGTATCAGGCACAACAACAACTACAGTTCAACTTTGACATGAAAGGCATCATGGCCTTGCTTGAGGACAGCACACATAGAGCACCTTATATATCTCAATCTAGAGAAGAAATGGTAAACATGCAGCAAAACAGCACAGAGGAGCAAGGGTTCTTGTACTCCATGCTCAATGGCTACCCTTCTGCACCCGAGACCTCAGCTGAAGAAAGTTTGTGGGATGATGGTCTGTGGAACTTGGATCATGGCAATTTCACTGTAGCTAGTGCAGCAAGCAAAGTTGGTCTATACAATTTAGTTGCTCCCTTCTGTTAA 777 0.4582 MYWGEVLGGHMGRGVMEEEVWRKGPWTAEEDRLLVEYVRLHGEGRWNSVSRLAGLKRNGKSCRLRWVNYLRPDLKRGQITPQEESIIVELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKSPSDAAEKARNRLLRKQQFQQQQQQQLQQQYQAQQQLQFNFDMKGIMALLEDSTHRAPYISQSREEMVNMQQNSTEEQGFLYSMLNGYPSAPETSAEESLWDDGLWNLDHGNFTVASAASKVGLYNLVAPFC* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03618 258 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Phac7g03618 258 ProSiteProfiles Myb-like domain profile. 22 70 IPR001005 -
Phac7g03618 258 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 17 217 IPR044676 GO:0003700|GO:0006355|GO:0043565
Phac7g03618 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 125 IPR017930 -
Phac7g03618 258 FunFam MYB transcription factor 80 163 - -
Phac7g03618 258 Coils Coil 136 156 - -
Phac7g03618 258 SUPERFAMILY Homeodomain-like 22 117 IPR009057 -
Phac7g03618 258 FunFam Myb transcription factor 23 75 - -
Phac7g03618 258 CDD SANT 80 121 IPR001005 -
Phac7g03618 258 SMART sant 22 72 IPR001005 -
Phac7g03618 258 SMART sant 75 123 IPR001005 -
Phac7g03618 258 Gene3D - 80 124 - -
Phac7g03618 258 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Phac7g03618 258 Pfam Myb-like DNA-binding domain 76 120 IPR001005 -
Phac7g03618 258 Gene3D - 23 75 - -
Phac7g03618 258 CDD SANT 25 70 IPR001005 -
Phac7g03618 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 70 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03618 Phac-Chr7 37857210 37858744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03618 16 258 MYB Transcription Factor Family AT4G13480 57.895 3.76e-90 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac7g03618 Myb_DNA-binding 2.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03618 K09422 - gmx:100795981 440.269