Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03606 ATGTCGATAAACCACTACTCCATGGACCTTCCCGAAACAACACTGTGGTGGCCCCAACAGCAGCAACAACCCATCCTAATGGAACCAACCCCAAACCCCTCCTCCACTTCCTGGCCCTCTGCAGACCCTCTGTGTCTCAACCTCAACAACCAAAACGATGACGTAGAGGAAGACGAGGAAGAGGACCGAACAACAACCACTACACAGCAAGAAGAAACTGAAGACGAGAAGGAACCCATGTTCGAGAAGCCTCTAACTCCAAGCGACGTGGGGAAGCTCAACCGCCTCGTAATCCCGAAGCAGCACGCCGAGAAGTACTTCCCGCTCAGTGGTGGCGGTGGCGGCGACTCGGGCGAGTGCAAGGGGCTGCTATTGAGTTTCGAGGACGAGTCGGGTAAGTGCTGGCGGTTTCGCTACTCCTACTGGAACAGCAGCCAGAGCTACGTGCTCACTAAAGGGTGGAGCCGCTATGTCAAGGACAAGCGCCTCGACACCGGAGACGTCGTCTTGTTCGAGCGCCACCGCGCCGACGCTCACCGCCTCTTCATCGGATGGAGGCGCCGGCGACACGGCGAAACCTCGCCGGTGCACGTTAGCAGCAGGGCGGTGGGGCACGGGAAGAGTGGCAATGGGAATAGTAAGAATGAGGGTGCTGCTACCGGTGGTGGTCTCGGGTGGACCAGAGGGTTCTATTCTGCGCATCCTTATCCTACGCATCAGCAGCACCTGCATAATCATCAGTCCTTGCCATACCAATACGACTGTCTTCATGCAGGAAGAGGGTCCCAAGGTCAGAGAGAAAGGACGAGAGCAGTGGGAACGAGTGGGAGTCCGAGTTCCAGTGGAAGTTCTAGTTCAAGGGTACTTAGGCTGTTTGGGGTGAACATGGAATGCGAAGCTGAAGATGATTCTGGACCCTCCACACTCCAATACTCCTACAATAGTACCAACATGCCCTCCACACAGGGCACACAAAACCCTCACCATTTCTACCATCCCCACCCCCCTCAACCTCAACCTCATCAAATCCTACGTCACCAACCATACTACTACTACTAG 1059 0.5552 MSINHYSMDLPETTLWWPQQQQQPILMEPTPNPSSTSWPSADPLCLNLNNQNDDVEEDEEEDRTTTTTQQEETEDEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGGGGGDSGECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDTGDVVLFERHRADAHRLFIGWRRRRHGETSPVHVSSRAVGHGKSGNGNSKNEGAATGGGLGWTRGFYSAHPYPTHQQHLHNHQSLPYQYDCLHAGRGSQGQRERTRAVGTSGSPSSSGSSSSRVLRLFGVNMECEAEDDSGPSTLQYSYNSTNMPSTQGTQNPHHFYHPHPPQPQPHQILRHQPYYYY* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03606 352 SMART B3_2 81 189 IPR003340 GO:0003677
Phac7g03606 352 MobiDBLite consensus disorder prediction 19 51 - -
Phac7g03606 352 MobiDBLite consensus disorder prediction 19 88 - -
Phac7g03606 352 ProSiteProfiles B3 DNA-binding domain profile. 81 189 IPR003340 GO:0003677
Phac7g03606 352 MobiDBLite consensus disorder prediction 66 83 - -
Phac7g03606 352 MobiDBLite consensus disorder prediction 256 286 - -
Phac7g03606 352 CDD B3_DNA 79 179 IPR003340 GO:0003677
Phac7g03606 352 MobiDBLite consensus disorder prediction 193 219 - -
Phac7g03606 352 MobiDBLite consensus disorder prediction 319 344 - -
Phac7g03606 352 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 57 307 IPR044800 GO:0003700
Phac7g03606 352 Gene3D - 69 198 IPR015300 -
Phac7g03606 352 Pfam B3 DNA binding domain 81 188 IPR003340 GO:0003677
Phac7g03606 352 MobiDBLite consensus disorder prediction 267 286 - -
Phac7g03606 352 SUPERFAMILY DNA-binding pseudobarrel domain 76 188 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03606 Phac-Chr7 37781097 37783810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03606 1 309 RAV Transcription Factor Family AT5G06250 43.312 1.10e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac7g03606 B3 9e-29 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03606 K09287 - gmx:100795470 383.645