Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03571 ATGAATATATGGTTTGATTGGAATCAGCTGGAATTGGAATTTGAACTGGTGGCTTGGGAGTTTGTGGAAGAAGAGCTTGAATGGCTATCCAATAAAGATGCATTTCCTTCTGTTGAAACATTTGTTGACCTATCATGTATTCAACCTGACACAGCCAAGATGCAAAAAACAACCCCAGTAACAACCCCAATGCTTGAGTACAGCACAGGCAGTAGCAACAGTAATAACAGCAGTAACAGTATTTCCCTCCTAAACAGCTGTGATCACCTTAAGGTCCCAGTCCGTGCACGGAGCAAGAGACGCAGTAGGTGTCGCCCTGGTATTGCTGATGAAAACTCTGGTCAGCAATTCTGGTGGAGACAACCAAGTAATGAAACTTCCAAGGCAGAAGAAAGGATGAAAATCTCGCCAATTGGGAGGAAATGTCAGCACTGTGGGGCTGAAAAAACTCCACAGTGGCGGGCAGGTCCCCTTGGGCCTAAAACACTTTGTAATGCATGTGGGGTTAGGTTTAAGTCTGGTCGGCTTGTGCCTGAATACCGTCCTGCTAGTAGCCCAACTTTTCGTAGTGATTTGCATTCTAATTCCCACAGGAAGATAACAGAGATGAGGAGGCAGAAGCAAACGGGAATGGGATAA 639 0.4554 MNIWFDWNQLELEFELVAWEFVEEELEWLSNKDAFPSVETFVDLSCIQPDTAKMQKTTPVTTPMLEYSTGSSNSNNSSNSISLLNSCDHLKVPVRARSKRRSRCRPGIADENSGQQFWWRQPSNETSKAEERMKISPIGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFRSDLHSNSHRKITEMRRQKQTGMG* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03571 212 Gene3D - 136 189 IPR013088 GO:0006355|GO:0008270
Phac7g03571 212 ProSitePatterns GATA-type zinc finger domain. 142 167 IPR000679 GO:0006355|GO:0043565
Phac7g03571 212 Pfam GATA zinc finger 142 175 IPR000679 GO:0006355|GO:0043565
Phac7g03571 212 SMART GATA_3 136 186 IPR000679 GO:0006355|GO:0043565
Phac7g03571 212 MobiDBLite consensus disorder prediction 182 212 - -
Phac7g03571 212 PANTHER GATA TRANSCRIPTION FACTOR 23 208 - -
Phac7g03571 212 CDD ZnF_GATA 141 189 IPR000679 GO:0006355|GO:0043565
Phac7g03571 212 ProSiteProfiles GATA-type zinc finger domain profile. 136 172 IPR000679 GO:0006355|GO:0043565
Phac7g03571 212 FunFam GATA transcription factor 130 211 - -
Phac7g03571 212 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 138 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03571 Phac-Chr7 37433167 37435165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03571 23 212 C2C2-Gata Transcription Factor Family AT3G24050 47.196 3.15e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac7g03571 GATA 6.9e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03571 - - gmx:100784527 303.523