Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03568 ATGGAGGCCATTGGTTCTGTGGATGACCTCTTGGATTTTTCGTTGGACATAGGTGAGGAAGATGATGACGAAGACAAACCTAGGAAATCCTGTCCTTCACTTAACTCAAAATGTGGCAACCCATCATTGTTTAATCCATTGGAGTTTGTGGAAGAAGAGCTTGAATGGCTATCCAATAAAGATGCATTTCCTTCTGTTGAAACATTTGTTGACCTATCATGTATTCAACCTGACACAGCCAAGATGCAAAAAACAACCCCAGTAACAACCCCAATGCTTGAGTACAGCACAGGCAGTAGCAACAGTAATAACAGCAGTAACAGTATTTCCCTCCTAAACAGCTGTGATCACCTTAAGGTCCCAGTCCGTGCACGGAGCAAGAGACGCAGTAGGTGTCGCCCTGGTATTGCTGATGAAAACTCTGGTCAGCAATTCTGGTGGAGACAACCAAGTAATGAAACTTCCAAGGCAGAAGAAAGGATGAAAATCTCGCCAATTGGGAGGAAATGTCAGCACTGTGGGGCTGAAAAAACTCCACAGTGGCGGGCAGGTCCCCTTGGGCCTAAAACACTTTGTAATGCATGTGGGGTTAGGTTTAAGTCTGGTCGGCTTGTGCCTGAATACCGTCCTGCTAGTAGCCCAACTTTTCGTAGTGATTTGCATTCTAATTCCCACAGGAAGATAACAGAGATGAGGAGGCAGAAGCAAACGGGAATGGGATAA 723 0.455 MEAIGSVDDLLDFSLDIGEEDDDEDKPRKSCPSLNSKCGNPSLFNPLEFVEEELEWLSNKDAFPSVETFVDLSCIQPDTAKMQKTTPVTTPMLEYSTGSSNSNNSSNSISLLNSCDHLKVPVRARSKRRSRCRPGIADENSGQQFWWRQPSNETSKAEERMKISPIGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFRSDLHSNSHRKITEMRRQKQTGMG* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03568 240 ProSiteProfiles GATA-type zinc finger domain profile. 164 200 IPR000679 GO:0006355|GO:0043565
Phac7g03568 240 ProSitePatterns GATA-type zinc finger domain. 170 195 IPR000679 GO:0006355|GO:0043565
Phac7g03568 240 Pfam GATA zinc finger 170 203 IPR000679 GO:0006355|GO:0043565
Phac7g03568 240 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 166 227 - -
Phac7g03568 240 MobiDBLite consensus disorder prediction 210 240 - -
Phac7g03568 240 Gene3D - 164 217 IPR013088 GO:0006355|GO:0008270
Phac7g03568 240 MobiDBLite consensus disorder prediction 15 37 - -
Phac7g03568 240 CDD ZnF_GATA 169 217 IPR000679 GO:0006355|GO:0043565
Phac7g03568 240 SMART GATA_3 164 214 IPR000679 GO:0006355|GO:0043565
Phac7g03568 240 PANTHER GATA TRANSCRIPTION FACTOR 7 236 - -
Phac7g03568 240 FunFam GATA transcription factor 158 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03568 Phac-Chr7 37431569 37435165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03568 42 240 C2C2-Gata Transcription Factor Family AT3G24050 45.982 1.27e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac7g03568 GATA 8.3e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03568 - - gmx:100784527 377.867