Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03561 ATGGATTCCGCCCCCAATCTTTCCCCTCATTCTCAGAACCATACCTCCACTCCACCGCACTCCCGTGTCAAGGGTTTCCTCGTCTACACTCGCCGCAAGCACTATCTCAATTCCGCCAATCATGCACCCAAAACACTCAAAACAGAGCATTTTCAAACCGAACAATCCCGCGGCTGCTGCCAGGACCCCCTTTTCAACCTCTCCAAGGTCAAGTCTCCCGATCCTCCCCAGGAATTAATCAAGACGGAATTGAATTCGCCGCCGCAGAAGAAGATTGTGGTGGTCAACAAGAAACCCGTTACCGTCAAGGAGCTCTTTGAAACTGGTTTGCTCGAAGGCGTTCCGGTCGTTTACGTTGGTTGCAAGAAGGATTCAACTTCGGAATTGCGGGGTGTAATTACAGATGGGGGGATCTTGTGCTCATGCCGTCTGTGCAATGGATGCAGGGTTATTCCACCTTCCCAATTTGAGATTCATGCATGTAACATATATAAGAGGGCAGCACAATATATTTGCCTTGAAAATGGGAAGAGCCTGCTTGAACTATTGAGAGCATGCAGGGCAGCTCCGCTACATACTTTGGAGACGACCATTCAAAATTTTGTTAGTTCTCCACCTGAGGAAAAATATTTTACTTGCAAAAGTTGCAGAGGATGTTTCCCTGCTTCCAATGTGGAAAGAGTGGGCCTTTTGTGTCTATCATGCGTGGAATCAAGGAAATCTGAAAGCAGTTCGATTCATGCTGTTGGCAAAAGAGTCAGGTCCCCTCGGCCAGTATTATTCTCCCGTTCATGTTCTTGTTGTACTTCTGAACTGTGTATTTCTCCTCAAACTAAGAGACACTGGAAGACAAGAACAAAATCATCAAAACTGTCATTAAAATTGAAGACTGCTCCAATTACTTCAAAGTGTTTATCTCCACAACATAAAAGTCAGTGGAGGATCTCTAAAAGGTATCAACGGATACATAAATTGATTTTTGAAGAGGATGGATTGCCTAATGGAGCAGAAGTAGCTTATTATGCACGGGGACAGAAACTGCTTGAGGGTATCAAAACACGCACTGGAATTGTCTGTCGATGCTGTAACACTGAGATCAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCTCGCAGGAAACCTTATGCATACATCTACACGTCGAATGGGGTGTCACTCCACGAGTTAGCAATATTTCTCTCAAAAGATCACAAATGCACTACAAAGCAGAATGATTATGCATGTGTTGTTTGTTGGGATGGTGGAAACCTGTTGCTCTGTGATGGATGTCCAAGGGCATTTCATAAAGAATGTGCATCTGTATCAAGTATTCCCCGGGGTGAGTGGTACTGTCAAATTTGTCAACACACAATTCTCAGAGAAAGGCCTGTATTATACAATGCCGATGCTGTGGCAGCTGGAAGGGTAGAAGGTGTTGATCCTATTGAGGAGATTGCCAAGAGATGCATTCGCATAGTGAAAGACATAGGAGCTGAGATTGGTGGATGTATTTTATGCAGGAGTTCTGACTTCAGCAGATCAGGATTTGGTCCTCGCACAATTATAATCTGTGATCAGTGTGAAAAGGAATATCATGTTGGTTGCTTGAGGGATCATAAGATGGCATTTCTGAAGGAGTTGCCAGAAGGGGATTGGCTTTGTTGCAATGATTGCACCAGAATACATACTACTTTGGAGAATCTCCTGGTTACAGTGGCTGAAAGACTTCCTGAATCTCTTTTGGATGTTATAAAGAAGAAGCATGTGGAAAGATGTTTAGAACCCCTTAATGAGATTGATGTAAGATGGAAACTTCTTAATGGAAAAATTGCGTCTCCTGAAACTAGGCCATTACTTTTGGAGGCAGTGGCCATGTTTAATGTAAGTTCTGTCTGTCTGTCTGTATGA 1914 0.441 MDSAPNLSPHSQNHTSTPPHSRVKGFLVYTRRKHYLNSANHAPKTLKTEHFQTEQSRGCCQDPLFNLSKVKSPDPPQELIKTELNSPPQKKIVVVNKKPVTVKELFETGLLEGVPVVYVGCKKDSTSELRGVITDGGILCSCRLCNGCRVIPPSQFEIHACNIYKRAAQYICLENGKSLLELLRACRAAPLHTLETTIQNFVSSPPEEKYFTCKSCRGCFPASNVERVGLLCLSCVESRKSESSSIHAVGKRVRSPRPVLFSRSCSCCTSELCISPQTKRHWKTRTKSSKLSLKLKTAPITSKCLSPQHKSQWRISKRYQRIHKLIFEEDGLPNGAEVAYYARGQKLLEGIKTRTGIVCRCCNTEISPSQFEVHAGWASRRKPYAYIYTSNGVSLHELAIFLSKDHKCTTKQNDYACVVCWDGGNLLLCDGCPRAFHKECASVSSIPRGEWYCQICQHTILRERPVLYNADAVAAGRVEGVDPIEEIAKRCIRIVKDIGAEIGGCILCRSSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKMAFLKELPEGDWLCCNDCTRIHTTLENLLVTVAERLPESLLDVIKKKHVERCLEPLNEIDVRWKLLNGKIASPETRPLLLEAVAMFNVSSVCLSV* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03561 637 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 402 479 IPR013083 -
Phac7g03561 637 PANTHER AUTOIMMUNE REGULATOR 55 629 - -
Phac7g03561 637 Pfam Tify domain binding domain 351 400 IPR032308 -
Phac7g03561 637 Pfam Tify domain binding domain 131 186 IPR032308 -
Phac7g03561 637 MobiDBLite consensus disorder prediction 1 20 - -
Phac7g03561 637 SUPERFAMILY FYVE/PHD zinc finger 402 459 IPR011011 -
Phac7g03561 637 SUPERFAMILY FYVE/PHD zinc finger 499 559 IPR011011 -
Phac7g03561 637 ProSiteProfiles Zinc finger PHD-type profile. 414 459 IPR019787 -
Phac7g03561 637 ProSitePatterns Zinc finger PHD-type signature. 417 456 IPR019786 -
Phac7g03561 637 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 503 563 IPR013083 -
Phac7g03561 637 SMART PHD_3 504 561 IPR001965 -
Phac7g03561 637 SMART PHD_3 416 457 IPR001965 -
Phac7g03561 637 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 501 563 - -
Phac7g03561 637 MobiDBLite consensus disorder prediction 1 23 - -
Phac7g03561 637 Pfam PHD-finger 417 458 IPR019787 -
Phac7g03561 637 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 403 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03561 Phac-Chr7 37359148 37370029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03561 66 629 PHD Transcription Factor Family AT2G36720 46.523 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03561 - - gmx:100816654 1062.75