Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03560 ATGGATTCCGCCCCCAATCTTTCCCCTCATTCTCAGAACCATACCTCCACTCCACCGCACTCCCGTGTCAAGGGTTTCCTCGTCTACACTCGCCGCAAGCACTATCTCAATTCCGCCAATCATGCACCCAAAACACTCAAAACAGAGCATTTTCAAACCGAACAATCCCGCGGCTGCTGCCAGGACCCCCTTTTCAACCTCTCCAAGGTCAAGTCTCCCGATCCTCCCCAGGAATTAATCAAGACGGAATTGAATTCGCCGCCGCAGAAGAAGATTGTGGTGGTCAACAAGAAACCCGTTACCGTCAAGGAGCTCTTTGAAACTGGTTTGCTCGAAGGCGTTCCGGTCGTTTACGTTGGTTGCAAGAAGGATTCAACTTCGGAATTGCGGGGTGTAATTACAGATGGGGGGATCTTGTGCTCATGCCGTCTGTGCAATGGATGCAGGGTTATTCCACCTTCCCAATTTGAGATTCATGCATGTAACATATATAAGAGGGCAGCACAATATATTTGCCTTGAAAATGGGAAGAGCCTGCTTGAACTATTGAGAGCATGCAGGGCAGCTCCGCTACATACTTTGGAGACGACCATTCAAAATTTTGTTAGTTCTCCACCTGAGGAAAAATATTTTACTTGCAAAAGTTGCAGAGGATGTTTCCCTGCTTCCAATGTGGAAAGAGTGGGCCTTTTGTGTCTATCATGCGTGGAATCAAGGAAATCTGAAAGCAGTTCGATTCATGCTGTTGGCAAAAGAGTCAGGTCCCCTCGGCCAGTATTATTCTCCCGTTCATGTTCTTGTTGTACTTCTGAACTGTGTATTTCTCCTCAAACTAAGAGACACTGGAAGACAAGAACAAAATCATCAAAACTGTCATTAAAATTGAAGACTGCTCCAATTACTTCAAAGTGTTTATCTCCACAACATAAAAGTCAGTGGAGGATCTCTAAAAGGTATCAACGGATACATAAATTGATTTTTGAAGAGGATGGATTGCCTAATGGAGCAGAAGTAGCTTATTATGCACGGGGACAGAAACTGCTTGAGGGTATCAAAACACGCACTGGAATTGTCTGTCGATGCTGTAACACTGAGATCAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCTCGCAGGAAACCTTATGCATACATCTACACGTCGAATGGGGTGTCACTCCACGAGTTAGCAATATTTCTCTCAAAAGATCACAAATGCACTACAAAGCAGAATGATTATGCATGTGTTGTTTGTTGGGATGGTGGAAACCTGTTGCTCTGTGATGGATGTCCAAGGGCATTTCATAAAGAATGTGCATCTGTATCAAGTATTCCCCGGGGTGAGTGGTACTGTCAAATTTGTCAACACACAATTCTCAGAGAAAGGCCTGTATTATACAATGCCGATGCTGTGGCAGCTGGAAGGGTAGAAGGTGTTGATCCTATTGAGGAGATTGCCAAGAGATGCATTCGCATAGTGAAAGACATAGGAGCTGAGATTGGTGGATGTATTTTATGCAGGAGTTCTGACTTCAGCAGATCAGGATTTGGTCCTCGCACAATTATAATCTGTGATCAGTGTGAAAAGGAATATCATGTTGGTTGCTTGAGGGATCATAAGATGGCATTTCTGAAGGAGTTGCCAGAAGGGGATTGGCTTTGTTGCAATGATTGCACCAGAATACATACTACTTTGGAGAATCTCCTGGTTACAGTGGCTGAAAGACTTCCTGAATCTCTTTTGGATGTTATAAAGAAGAAGCATGTGGAAAGATGTTTAGAACCCCTTAATGAGATTGATGTAAGATGGAAACTTCTTAATGGAAAAATTGCGTCTCCTGAAACTAGGCCATTACTTTTGGAGGCAGTGGCCATGTTTAATGAATGCTTTGATCCTATAGTTGATCCAGCTGCTGGACGTGACCTCATTCCTGCCATGGTTTATGGAAGGAATTTGCAGACTCAGGATTTTGGAGGAATGTATTGTGCATTATTGATTGTCAATTCATCTGTGGTATCCGCTGGCATGCTTCGAATTTTTGGTGAGGACATTGCCGAACTCCCCATAGTTGCAACAAGATATAAGAATCGTGGGAAGGGCTACTTCCAAACCCTTTTCTCGTGCATTGAAAGGCTGCTGGCTTTCTTGAAAGTGAAAAATCTCGTGCTACCGGCTGCCGAAGAAGCAGAATCTATATGGACAGAAAAATTCGGATTTAGCAAGATGAAACCCGACGAGCTTACCAACTATAGAATGAATTGTCATCAGATCATGGCATTTAAGGGGACAATAATGCTTCATAAAACGGTGCCTCGTTGTAGGGTCATCAATTCTCAATCATCAGAAATCTATATTCAAGATAGCCAATCGTGA 2379 0.4376 MDSAPNLSPHSQNHTSTPPHSRVKGFLVYTRRKHYLNSANHAPKTLKTEHFQTEQSRGCCQDPLFNLSKVKSPDPPQELIKTELNSPPQKKIVVVNKKPVTVKELFETGLLEGVPVVYVGCKKDSTSELRGVITDGGILCSCRLCNGCRVIPPSQFEIHACNIYKRAAQYICLENGKSLLELLRACRAAPLHTLETTIQNFVSSPPEEKYFTCKSCRGCFPASNVERVGLLCLSCVESRKSESSSIHAVGKRVRSPRPVLFSRSCSCCTSELCISPQTKRHWKTRTKSSKLSLKLKTAPITSKCLSPQHKSQWRISKRYQRIHKLIFEEDGLPNGAEVAYYARGQKLLEGIKTRTGIVCRCCNTEISPSQFEVHAGWASRRKPYAYIYTSNGVSLHELAIFLSKDHKCTTKQNDYACVVCWDGGNLLLCDGCPRAFHKECASVSSIPRGEWYCQICQHTILRERPVLYNADAVAAGRVEGVDPIEEIAKRCIRIVKDIGAEIGGCILCRSSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKMAFLKELPEGDWLCCNDCTRIHTTLENLLVTVAERLPESLLDVIKKKHVERCLEPLNEIDVRWKLLNGKIASPETRPLLLEAVAMFNECFDPIVDPAAGRDLIPAMVYGRNLQTQDFGGMYCALLIVNSSVVSAGMLRIFGEDIAELPIVATRYKNRGKGYFQTLFSCIERLLAFLKVKNLVLPAAEEAESIWTEKFGFSKMKPDELTNYRMNCHQIMAFKGTIMLHKTVPRCRVINSQSSEIYIQDSQS* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03560 792 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 501 563 - -
Phac7g03560 792 MobiDBLite consensus disorder prediction 1 20 - -
Phac7g03560 792 SUPERFAMILY FYVE/PHD zinc finger 500 559 IPR011011 -
Phac7g03560 792 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 503 563 IPR013083 -
Phac7g03560 792 ProSiteProfiles Zinc finger PHD-type profile. 414 459 IPR019787 -
Phac7g03560 792 SUPERFAMILY FYVE/PHD zinc finger 402 459 IPR011011 -
Phac7g03560 792 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 403 480 - -
Phac7g03560 792 Pfam Tify domain binding domain 131 186 IPR032308 -
Phac7g03560 792 Pfam Tify domain binding domain 351 400 IPR032308 -
Phac7g03560 792 PANTHER AUTOIMMUNE REGULATOR 55 771 - -
Phac7g03560 792 ProSitePatterns Zinc finger PHD-type signature. 417 456 IPR019786 -
Phac7g03560 792 SMART PHD_3 504 561 IPR001965 -
Phac7g03560 792 SMART PHD_3 416 457 IPR001965 -
Phac7g03560 792 MobiDBLite consensus disorder prediction 1 23 - -
Phac7g03560 792 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 402 479 IPR013083 -
Phac7g03560 792 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 660 746 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03560 Phac-Chr7 37359148 37370029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03560 66 779 PHD Transcription Factor Family AT2G36720 48.674 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03560 - - gmx:100816654 1352.42