Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03508 ATGGAAATGGAAGATCACCATCACCACCACCACCATCAGCATCAGCATCAACACCACTTTGGCGTGAACGATCTCAGGCAAGTCGTCAATGGGCCGAGGACCTCCAACAACAACTACCCCTCCATGCCGCCGCACCCAACGGTGGAGCTTTTCCCCGGCCACCGGAATCTCACACCCTTGCCCATTCCCCAACACCATCAACAACACTACGAGGTTATGATGTTCGGTCGTGACATAATGCCACCTAGCCTTCACGACTTCGCTTCCACACCCCATGATTCTGTTGCTGCTGCAGCAGCCACCATGACTCTACCCACTCCACCTACCTTTGATGCCGAGGGTGCAGGTTGCATCGGTGGAGACCCCTCCACTGGAAGATGGCCCAGACAAGAGACCCTCACTCTCCTTGAGATCAGATCTCGCTTGGACCCTAAATTCAAAGAGGCTAATCACAAAGGACCCTTATGGGATGAAGTCTCCAGGATCATGTCTGAAGAACATGGATATCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAATTTGTACAAATATTACAAGAAGACAAAAGATGGTAAGGCGGGAAGACATGATGGGAAGCATTACAGATTCTTTCGTCAACTTGAAGCCTTATATGGAGAAAATAGTAGCACAGTTTCAGTCCCAGAAACCAATGTTGTTGGCAGCATTCATTTTCAAGCAAGCAGCCATGCCCCCTCCCAGACCAATCAAGATAAGTTTCAGTCTCACAATAGCAAGAATTGTGATAGCCTCAGCCTCACCAACTCCACTAACTTTGATACAACATCATCTGATGATGACAATGACCACCATAGCATGGAGAATGAGTCCATAGAGAAGAGGAGAAAGAGGAACAGTGGGAGGAGTTGGAAGGTGAAGATAAAAGATTTCATTGACTCGCAGATGAGGAAGCTTGTGGAGAAGCAGAAGGAGTGGTTGGATAAACTGGTGAAGACACTGGAAGAGAAGGAGAAGGAGAGGATGTCAAGAGAGGAAGAATGGAGGAAACAAGAGGCAAACAGGTTAGAGAGGGAGCAAGAGTTTTGGGCGAAAGAGAGAGCATGGATTGAAGCCAGGGATGCTGCTCTAATGGAGGCTTTACAAAAGCTGACTGGAAGAGAAATAATGAAGGCCGAAACTCCCAATGATGGTATAAATATAACGGCTGCTGAAGTTCAAAAGCATAGTGAAAACCAGAATAATGAAGATGAGAGTGAAATGTTAAACAGCAGCAATGTTATCAGAGGTGCTGATAGGTGGCCAGAATCTGAAATTACAAGGCTTCAACAGCTGAGAGCTGAGATAGAGACAAGGTTTCCATATAGTGAAATTTCAGAAGAGGTTTCATGGGAGGTAGTAGCAACCAAAATGGCTTGTTTTGGCTACGAAAGGAGTGCTTTGATGTGCAAAGAGAAATGGGAAAGTATCAGTAACTATCCAAGGGAGGGTGACAATAAGGAAGAGAGCAAGAAGTGCAAGGAAAACTCTAGAAGCTGCTTTTACTTCAAGAACAACGATGATCATCGACAATCTTCCTTATACGACCAAGGAAGTGCCTATTGTGATGATATCAGTGATCAAGGGAAAGAGATTGAGAGGCTACAAACAAATAATAGTTCTTTACCTTCAAAATCCAATGCTGGAAATGTTGATCCCTCTGATAGTTGCTTCCCCTTCTTGATGAGTACTGAGAGTGGAAACTTGTGGGAGAACTACGGCCTAAAGCTCAATAAAGAAAACCAAAACCATTGA 1776 0.4521 MEMEDHHHHHHHQHQHQHHFGVNDLRQVVNGPRTSNNNYPSMPPHPTVELFPGHRNLTPLPIPQHHQQHYEVMMFGRDIMPPSLHDFASTPHDSVAAAAATMTLPTPPTFDAEGAGCIGGDPSTGRWPRQETLTLLEIRSRLDPKFKEANHKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKDGKAGRHDGKHYRFFRQLEALYGENSSTVSVPETNVVGSIHFQASSHAPSQTNQDKFQSHNSKNCDSLSLTNSTNFDTTSSDDDNDHHSMENESIEKRRKRNSGRSWKVKIKDFIDSQMRKLVEKQKEWLDKLVKTLEEKEKERMSREEEWRKQEANRLEREQEFWAKERAWIEARDAALMEALQKLTGREIMKAETPNDGINITAAEVQKHSENQNNEDESEMLNSSNVIRGADRWPESEITRLQQLRAEIETRFPYSEISEEVSWEVVATKMACFGYERSALMCKEKWESISNYPREGDNKEESKKCKENSRSCFYFKNNDDHRQSSLYDQGSAYCDDISDQGKEIERLQTNNSSLPSKSNAGNVDPSDSCFPFLMSTESGNLWENYGLKLNKENQNH* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03508 591 CDD GT1 427 490 - -
Phac7g03508 591 ProSiteProfiles Myb-like domain profile. 427 485 IPR001005 -
Phac7g03508 591 PANTHER FI21293P1 114 542 - -
Phac7g03508 591 MobiDBLite consensus disorder prediction 1 20 - -
Phac7g03508 591 FunFam Trihelix transcription factor GT-2 428 490 - -
Phac7g03508 591 MobiDBLite consensus disorder prediction 236 293 - -
Phac7g03508 591 Pfam Myb/SANT-like DNA-binding domain 426 512 IPR044822 -
Phac7g03508 591 Pfam Myb/SANT-like DNA-binding domain 126 212 IPR044822 -
Phac7g03508 591 Coils Coil 314 353 - -
Phac7g03508 591 MobiDBLite consensus disorder prediction 271 291 - -
Phac7g03508 591 FunFam trihelix transcription factor PTL-like 127 189 - -
Phac7g03508 591 SMART sant 123 186 IPR001005 -
Phac7g03508 591 SMART sant 424 487 IPR001005 -
Phac7g03508 591 Gene3D - 127 189 - -
Phac7g03508 591 Gene3D - 428 489 - -
Phac7g03508 591 CDD GT1 126 191 - -
Phac7g03508 591 MobiDBLite consensus disorder prediction 236 270 - -
Phac7g03508 591 ProSiteProfiles Myb-like domain profile. 119 184 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03508 Phac-Chr7 36926662 36930692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03508 15 587 Trihelix Transcription Factor Family AT5G03680 42.881 7.34e-131 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac7g03508 Myb_DNA-bind_4 4.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03508 - - aprc:113870891 885.945