Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03506 ATGGCTTCACTCAATTGCCATCAACTTTCACTCGCAACACACACCTTCACACACCACATAGACACCACCACCACCACCATGTATTCTAATAATGCCACCGGCAGCAGCAGAGCCTCTTCCGAAACCGGCCGCTACCGCGGTGTCCGCCGTAGGAGCAACGGGAAATGGGTGTCTGAGATTCGTGAGCCCAAAAAGCCTAGCAGGATTTGGTTAGGCACATTCCCTACACCTGAAATGGCCGCAGTGGCTTATGACGTGGCAGCTTATGCTCTCAAGGGTAAGGACGCTGAGCTCAATTTCCCTGACTCCGCTTCTTCCCTTCCTGTCCCCGCTTCACTCTCGGCGCGTGACATTCAGATGGCGGCAGCCGCTGCGGCGGGGGCTGCTGGAGCTGCGAAGGATGCTATGCAGACGCCAACAGGGAATTATAACTCTTCAGGGTTACAAGAGAACCAAGCAGGGACGAGTAACCAGTTCGTGGACGAGGATTTGATCTTTGACATGCCGAATGTTCTTGTCAATATGGCTCAAGGGATGCTGCTTAGTCCTCCTCCTTTTGACATTGGTTTGGAACCGAATAGCCCAGAAAACATCGAACATGAAACAAGCCTGTGGAATTTCCCTTAA 627 0.5247 MASLNCHQLSLATHTFTHHIDTTTTTMYSNNATGSSRASSETGRYRGVRRRSNGKWVSEIREPKKPSRIWLGTFPTPEMAAVAYDVAAYALKGKDAELNFPDSASSLPVPASLSARDIQMAAAAAAGAAGAAKDAMQTPTGNYNSSGLQENQAGTSNQFVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGLEPNSPENIEHETSLWNFP* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03506 208 Gene3D AP2/ERF domain 43 102 IPR036955 GO:0003700|GO:0006355
Phac7g03506 208 PRINTS Ethylene responsive element binding protein signature 67 83 IPR001471 GO:0003700|GO:0006355
Phac7g03506 208 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Phac7g03506 208 SMART rav1_2 44 107 IPR001471 GO:0003700|GO:0006355
Phac7g03506 208 MobiDBLite consensus disorder prediction 28 50 - -
Phac7g03506 208 CDD AP2 44 103 IPR001471 GO:0003700|GO:0006355
Phac7g03506 208 SUPERFAMILY DNA-binding domain 44 103 IPR016177 GO:0003677
Phac7g03506 208 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
Phac7g03506 208 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 41 206 IPR045277 GO:0003700
Phac7g03506 208 FunFam Ethylene-responsive transcription factor 2 44 102 - -
Phac7g03506 208 Pfam AP2 domain 44 93 IPR001471 GO:0003700|GO:0006355
Phac7g03506 208 MobiDBLite consensus disorder prediction 28 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03506 Phac-Chr7 36892139 36893882 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03506 45 208 AP2-EREBP Transcription Factor Family AT2G36450 59.538 1.04e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac7g03506 AP2 1.2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03506 - - pvu:PHAVU_007G222600g 374.015