Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03504 ATGCAGAAACGAAAAGCTGGGAGGAAGAAGTTCCAAGAGACACGTCACCCCGTGTACAGAGGCGTAAGGCAGAGGAAGGGGAAGTGGGTGTGTGAGTTCCGACAACCTAATAAGAAGAACGCACGCCTGTGGCTTGGGACCTTCTCTCGCCCCGACATGGCTGCTGTTGCGTTTGACGTTGCCGCATTGGCTTTCAAGGGTGACAGGGCTTCCTTGAACTTCCCGCAAGCCATTTCCCTCTTGCCGCGTCTCAGTTCAGGTACGTCCTCTGTAAGGACAATTCAGTTTGCCGCCACGCAGGCCGCGGAGAAGCTTCTTTCTTGCACTGAGTTTCAAAAGCTGAGGGACGATGTTTCTTCTCATGGAGGTTCTGGAAACTTCTTTTGGAATGAAGATGGTTTGAAGTTGGCATCCGAAGAAAGTTCTAGAAGGTTCTTTTGGGATGAGGAGGAGGTGTTTAACATGCCGGAGTTGTTGAACAGCATGGCGGAAGCACTGATCATTGCACCTCCGGCTTTGCAGAAGGGGTTCAATTGGGTTGATGGGGAAACCACAGTAGATTTGACTCTATGGTGA 576 0.5104 MQKRKAGRKKFQETRHPVYRGVRQRKGKWVCEFRQPNKKNARLWLGTFSRPDMAAVAFDVAALAFKGDRASLNFPQAISLLPRLSSGTSSVRTIQFAATQAAEKLLSCTEFQKLRDDVSSHGGSGNFFWNEDGLKLASEESSRRFFWDEEEVFNMPELLNSMAEALIIAPPALQKGFNWVDGETTVDLTLW* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03504 191 PRINTS Ethylene responsive element binding protein signature 57 77 IPR001471 GO:0003700|GO:0006355
Phac7g03504 191 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Phac7g03504 191 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Phac7g03504 191 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 3 191 IPR045277 GO:0003700
Phac7g03504 191 SUPERFAMILY DNA-binding domain 18 76 IPR016177 GO:0003677
Phac7g03504 191 CDD AP2 19 77 IPR001471 GO:0003700|GO:0006355
Phac7g03504 191 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Phac7g03504 191 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
Phac7g03504 191 Gene3D AP2/ERF domain 18 77 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03504 Phac-Chr7 36879313 36880360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03504 3 191 AP2-EREBP Transcription Factor Family AT4G25470 43.005 3.62e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac7g03504 AP2 9.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03504 - - var:108324544 306.605