Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03500 ATGGACTTGCAGTTGAAGCAATGGAGAAACCACCATGAGTCAGAACAACAACATTCCCCAAACATGCCAAAGTTTCTCCCTCAACACCATCCACCACCTGCCTGTGCAACACTCCCTCTCTTTCTTCCTCAACCCAGCACCAAAGTCATCATTCTGCCATCTTTTTCTGATTCAACCCTACCTTCTGCACCTCCCAGATTTCCCAGGAAGGAGAGTTGTTTCAGCTTTGCACAGCGGCAAGAGTTTGAGTTGCAGGCTCTGATATTCAGGTACATGCAGGCCGATGCACCTGTTCCTCCTCAGCTGCTTCAACCAATCAAGAAAAGCTTCCTTCATTCCCCTCCCCTTTTCCTTCAACTTTATCACCCTGCATTGTTGGAATCAGGGTACTATTGGGGAAGAGAAGCAGAGGATCCGGAGCCAGGGCGGTGCCGGAGGACGGACGGGAAGAAGTGGCGGTGCTCGAGGGAGGCGATGGATGATCAGAAGTACTGCCAGCGGCACATGCATCGTGGCCGAAACCGTTCAAGAAAGCCTGTGGAACAATCTAATGCATCATCTTCTTCACCCTCTCCTTTCTTCAAACATCATCTCCTTCACCTCAATCAGAGTTCCTCTGGGGCCAAGAGTGACAGCAAGAGCTTGTCTGAAAACCATGATCCTGTGGATGGGGATGGCAGATCTGGTGGCCATGTCCTGAGGCATTTCTTTGATGATTTGCCAAGGACACTGCAAGAGCCTGACCATGGTGAAAACAAAGGTATCCAGAACAACAACAATGGAACATATCTTTCTATGTCAACACCAGGAATCACTTCCTCGGATGTGTCATTGAAACTGTCCACTGGTCATGCTTCAATGGGAGGACCACTTGCAGAGGCACTGAGATCATCCACCTCCACTTCTTCACCAACCAGTGTTCTGCTACAGTTGCCAACTAGTTCTGCTTGTGAGACAAACTTCATTAGCATGTAA 975 0.4913 MDLQLKQWRNHHESEQQHSPNMPKFLPQHHPPPACATLPLFLPQPSTKVIILPSFSDSTLPSAPPRFPRKESCFSFAQRQEFELQALIFRYMQADAPVPPQLLQPIKKSFLHSPPLFLQLYHPALLESGYYWGREAEDPEPGRCRRTDGKKWRCSREAMDDQKYCQRHMHRGRNRSRKPVEQSNASSSSPSPFFKHHLLHLNQSSSGAKSDSKSLSENHDPVDGDGRSGGHVLRHFFDDLPRTLQEPDHGENKGIQNNNNGTYLSMSTPGITSSDVSLKLSTGHASMGGPLAEALRSSTSTSSPTSVLLQLPTSSACETNFISM* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03500 324 MobiDBLite consensus disorder prediction 179 212 - -
Phac7g03500 324 MobiDBLite consensus disorder prediction 164 233 - -
Phac7g03500 324 Pfam QLQ 74 106 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac7g03500 324 PANTHER GROWTH-REGULATING FACTOR 5 29 275 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phac7g03500 324 MobiDBLite consensus disorder prediction 1 29 - -
Phac7g03500 324 ProSiteProfiles WRC domain profile. 138 182 IPR014977 -
Phac7g03500 324 MobiDBLite consensus disorder prediction 1 18 - -
Phac7g03500 324 Pfam WRC 139 181 IPR014977 -
Phac7g03500 324 SMART QLQ_2 72 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac7g03500 324 ProSiteProfiles QLQ domain profile. 73 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac7g03500 324 MobiDBLite consensus disorder prediction 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03500 Phac-Chr7 36833194 36836469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03500 1 315 GRF Transcription Factor Family AT3G52910 41.902 5.83e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Phac7g03500 WRC 5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03500 - - gmx:100817197 459.144