Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03495 ATGGCCGGCGATATTAAGGAGGGGAGAGCTTTGGCAATAGGGTATTCTTTTCTTTTGCTGCTATTGACTTCACTTCTTTGTAGCACTGAGGGGTTGAACACTGAGGGGCAAATCTTGCTAGAGCTTAAGAATGGACTTCATGATAAATCTAATGTTTTGGAAAATTGGAAGCGTACTGATGAAACCCCATGTGGATGGAAAGGTGTAAATTGCACTTATGATAAGTATAACAATCCAGTGGTTGCATCTCTTAATTTGACTTCAATGGATCTTTCTGGAACTCTAAATGCTTCTGGCATTGGGGGTCTGACCCATCTGACTTATCTCAATCTTGCCTACAATGGATTGACTGGAAATATCCCCAAGGAGATTGGTGATTGCTTGAATTTGGAATATCTTTATTTGAACAATAATCAGTTTGAGGGCACTATTCCGGCTGAATTGGGTAAGCTGTCTGTTTTGAGAAGTTTGAATATTTACAACAACAAACTCACTGGTTTGATTCCATATGAGATTGGGAACTTGTCTTCAATGGTTGAGCTAGTAGCCTACAGCAACTTTCTTGAGGGACCCCTGCCTCGTTCCATTGGAAATCTTAAGAATCTTGTAAATTTCAGAGCTGGGGCAAATAACATTACTGGTAACTTGCCAAAGGAAATTGGTGGATGTAAGAGATTAATGCGTCTAGGTCTTGCACAAAATCAGATAGGAGGGGAGATACCAAGGGAGATTGGGATGCTTGCCAGCTTGAAAGAATTGGTTTTATGGGGAAACCAGCTGTCAGGACCTATTCCTAAAGAGATTGGGAATTGTAGCAGTCTTGAGAACATTGCTATATATGGGAATTATCTTATTGGACCTTTACCTAAGGAAATTGGCAACCTCAAATCCTTGAGGTGGCTGTATGTTTACAGAAACAAGTTGAACGGAACCATTCCAAGGGAAATTGGAAATCTTACTTCATGTTTAGACATTGATTTCTCAGAGAACTCTTTAGTAGGTAGTATCCCTTCAGAGTTTGGTAAAATAAGTGATCTAAGTTTGCTTTTTCTCTTTGAGAACCATCTAACTGGTGTTATACCAAATGAGTTAAGTAGCTTGAAAAACCTGTCAAAGCTAGACCTGTCAATAAATAATCTCACAGGTCCAATTCCATTTGGCTTCCAATATTTGACTAAAATGAAGCAGTTGCAACTTTTTGACAACTCCCTGAGTGGTATTATTCCCCCGGGACTTGGACTTCATAGTCCCCTTTGGGTTGTTGACTTTTCTGACAACAACTTGACAGGAAGAATACCTCTTCATCTGTGCCGAAATTCCAGTTTGATGCTGTTGAATCTTGCAGCTAATCATCTTTATGGAAATATACCAACAGGTATACTAAACTGTAAATCATTGGCACAGTTGTTGATACTTGGAAACAGGCTTACTGGAAGCTTCCCTTTAGAATTGTGTAAGCTGGAGAACTTGACTGCCATTGATTTGAATGAAAACAGGTTCAGTGGTACACTCCCTGATGATATTGGGAACTGCCACAGACTGCAAAGGCTTCATATTGCCAACAATTACTTCACATTGGAGTTGCCTAAGGAAATAGGTAATCTCTCTCAATTGGTGACCTTTAATGTTTCGTCAAATCTTTTCACTGGAAGAATCCCACCTGAAATTTTTTCGTGTCAGAGGCTACAAAGGCTTGATCTCAGCCAGAATAACTTTTCTGGTTCCTTGCCTGATGAGATTGGAACACTTCAGCACTTGGAGATTCTCAAGGTTTCAAACAATAGGCTGTCTGGATGTATTCCTGCAGCATTAGGCAATCTGTCTCATTTGAACTGGTTGTTGATGGATGGCAACTATTTTTTCGGCGAAATACCTCCTCAGTTAGGTTATCTTTCAAGCTTGCAAATTGCAATGGATCTCAGTTACAATAACCTTTCTGGAAAAATACCAGTTCAGCTTGGCAGTCTCAACATGCTTGAGTATCTCTATCTCAATAACAACCATTTGGATGGTGAAATTCCCAGCACATTTGAAGAGCTATCAAGCTTGTTGGGATGCAATTTCTCATTCAATAACCTCTCTGGGCCTATTCCTTCCACTAAAATTTTCCGAAGTATGGCTTTGAGCAGCTATATTGGTGGAAAGAATGGCCTCTGTGGTGCACCTCTCGGTGACTGCAGCACCAATTCTGCTTCTCACTCTGATACTTCAGGGAAAAGTTTTGATTCTCCTCGCGCTAAAATAGTCATGATCATTGCAGCTTCTGTTGGAGGTATTTCACTCATTTTCATCTTAGTTATTTTATATTTTATGAGACGTCCTCGGGAGTCAATTGATTCCTTTGGAGGCACTGAGGCTCCCTCCCCAGATTCAGATATCTATTTCCCTCCAAAGGAAGGTTTGACATTCCATGATCTAGTTGAAGCTACAAAAAGATTTCATGAAAGCTATGTTATTGGTAAGGGAGCATGTGGAACCGTTTATAAGGCAGTGATGAAATCTGGTGAGACCATTGCTGTTAAGAAGTTAGCATCAAACAGGGAAGGGAACAACATTGAGAATAGCTTCAGAGCTGAAATATCAACTCTGGGAAGAATAAGGCATCGGAACATAGTGAAACTGTATGGCTTTTGCTACCACCAGGGTTCCAATCTCCTGCTATATGAGTACATGGAAAGAGGTAGCTTAGGTGAACTATTGCATGGTTCTGCATCTAGTTTGGAGTGGTCAATTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGTCTTGCTTACTTGCATCATGACTGTAAACCAAAGATTATCCACCGTGATATAAAATCTAACAACATTCTACTGGATGAAAATTTTGAGGCTCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGACATGCCCCAGTCAAAATCAATGTCTGCTGTTGCTGGATCTTATGGCTATATTGCTCCTGAATATGCATATACCATGAAGGTCACAGAAAAGTGTGACATCTACAGTTATGGTGTTGTGCTCTTGGAATTGCTCACTGGAAGAACACCAGTTCAGCCACTAGATCAAGGAGGAGATCTTGTCTCATGGGTGAGGAACTATATCAAGGATCACAACAATTCGCTGACGCCGGAGATACTTGATACTCGTGTAGATCTGGAAGACCAAACCACAGTGAATCACATGCTCACTGTTTTGAAGCTTGCTTTAGTATGCACAAGTGTGTCTCCTTCAAAGAGGCCATCAATGAGGGATGTTGTGAAGATGCTTATTGAGTCCAATGAGAGAGAAGGAAACTTGACACTCACTCAAACATACCATGATCTTCCTTCCAAAGATGGCTTGTGA 3336 0.4071 MAGDIKEGRALAIGYSFLLLLLTSLLCSTEGLNTEGQILLELKNGLHDKSNVLENWKRTDETPCGWKGVNCTYDKYNNPVVASLNLTSMDLSGTLNASGIGGLTHLTYLNLAYNGLTGNIPKEIGDCLNLEYLYLNNNQFEGTIPAELGKLSVLRSLNIYNNKLTGLIPYEIGNLSSMVELVAYSNFLEGPLPRSIGNLKNLVNFRAGANNITGNLPKEIGGCKRLMRLGLAQNQIGGEIPREIGMLASLKELVLWGNQLSGPIPKEIGNCSSLENIAIYGNYLIGPLPKEIGNLKSLRWLYVYRNKLNGTIPREIGNLTSCLDIDFSENSLVGSIPSEFGKISDLSLLFLFENHLTGVIPNELSSLKNLSKLDLSINNLTGPIPFGFQYLTKMKQLQLFDNSLSGIIPPGLGLHSPLWVVDFSDNNLTGRIPLHLCRNSSLMLLNLAANHLYGNIPTGILNCKSLAQLLILGNRLTGSFPLELCKLENLTAIDLNENRFSGTLPDDIGNCHRLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNLFTGRIPPEIFSCQRLQRLDLSQNNFSGSLPDEIGTLQHLEILKVSNNRLSGCIPAALGNLSHLNWLLMDGNYFFGEIPPQLGYLSSLQIAMDLSYNNLSGKIPVQLGSLNMLEYLYLNNNHLDGEIPSTFEELSSLLGCNFSFNNLSGPIPSTKIFRSMALSSYIGGKNGLCGAPLGDCSTNSASHSDTSGKSFDSPRAKIVMIIAASVGGISLIFILVILYFMRRPRESIDSFGGTEAPSPDSDIYFPPKEGLTFHDLVEATKRFHESYVIGKGACGTVYKAVMKSGETIAVKKLASNREGNNIENSFRAEISTLGRIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGELLHGSASSLEWSIRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLDQGGDLVSWVRNYIKDHNNSLTPEILDTRVDLEDQTTVNHMLTVLKLALVCTSVSPSKRPSMRDVVKMLIESNEREGNLTLTQTYHDLPSKDGL* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03495 1111 ProSiteProfiles Protein kinase domain profile. 813 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g03495 1111 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 891 1103 - -
Phac7g03495 1111 SUPERFAMILY L domain-like 386 481 - -
Phac7g03495 1111 Pfam Protein kinase domain 814 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g03495 1111 Gene3D Ribonuclease Inhibitor 187 280 IPR032675 -
Phac7g03495 1111 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 287 391 - -
Phac7g03495 1111 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 415 730 - -
Phac7g03495 1111 Gene3D Ribonuclease Inhibitor 31 186 IPR032675 -
Phac7g03495 1111 SUPERFAMILY L domain-like 52 404 - -
Phac7g03495 1111 Pfam Leucine Rich Repeat 129 151 IPR001611 GO:0005515
Phac7g03495 1111 Pfam Leucine Rich Repeat 154 175 IPR001611 GO:0005515
Phac7g03495 1111 Pfam Leucine Rich Repeat 659 680 IPR001611 GO:0005515
Phac7g03495 1111 Gene3D Transferase(Phosphotransferase) domain 1 891 1104 - -
Phac7g03495 1111 Pfam Leucine rich repeat 561 619 IPR001611 GO:0005515
Phac7g03495 1111 Gene3D Ribonuclease Inhibitor 281 388 IPR032675 -
Phac7g03495 1111 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 783 890 - -
Phac7g03495 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 934 946 IPR008271 GO:0004672|GO:0006468
Phac7g03495 1111 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 31 193 - -
Phac7g03495 1111 SMART LRR_typ_2 656 679 IPR003591 -
Phac7g03495 1111 SMART LRR_typ_2 247 271 IPR003591 -
Phac7g03495 1111 SMART LRR_typ_2 367 390 IPR003591 -
Phac7g03495 1111 SMART LRR_typ_2 391 415 IPR003591 -
Phac7g03495 1111 SMART LRR_typ_2 535 559 IPR003591 -
Phac7g03495 1111 SMART LRR_typ_2 295 319 IPR003591 -
Phac7g03495 1111 SMART LRR_typ_2 103 127 IPR003591 -
Phac7g03495 1111 SMART LRR_typ_2 151 174 IPR003591 -
Phac7g03495 1111 SMART LRR_typ_2 487 511 IPR003591 -
Phac7g03495 1111 SMART LRR_typ_2 583 607 IPR003591 -
Phac7g03495 1111 Gene3D Phosphorylase Kinase; domain 1 788 890 - -
Phac7g03495 1111 SUPERFAMILY Protein kinase-like (PK-like) 792 1086 IPR011009 -
Phac7g03495 1111 Gene3D Ribonuclease Inhibitor 389 735 IPR032675 -
Phac7g03495 1111 SUPERFAMILY L domain-like 469 724 - -
Phac7g03495 1111 SMART serkin_6 813 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g03495 1111 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Phac7g03495 1111 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 194 286 - -
Phac7g03495 1111 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 391 1087 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03495 Phac-Chr7 36782759 36788015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03495 32 1088 Receptor kinase-like Gene Family AT5G56040 37.838 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac7g03495 Pkinase 4.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03495 - - gmx:100805792 1955.64