Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03488 ATGGGGCATAGACATTTATATAGCTCATCTCCAATGTTTGAGGGTGAACCTGACCCGAACTGGAATCATATGCATACCGATCAACAATATGTGAACCTTGGTAGAAGTACCGCTTCAGACAATGGTTCTTTTATTTATCCTTTGGAAAATATGTCCATAGATAGCATCTCTTTTCCATCTCATTGGAACACTGCGCCAAGGTCAAATGGATATGCCTCCACAAGTCTCAACATTGAAGCACCCCCTCATCAAACAGATGTATCAGGCACTTCTCATGATCATTTTCTGCATTCATCAAGTGGCGGAATGTTTTATGCGGTGTCTGAAAATTATGTACACCAGCCCTCTAGTTCCAATTATGACAGACAATCATTTCCTGTTGCTGATGGGGGTTTTATTGATCTCACAATGGGAAATGGGCGAGGGCCTCACAAGCGGAAGAGCCCTGGAGTTCCTTCAGTCTGTGAGAGAGGAAGTACAAGCAGATGTTTTAATGCTGCAAGTGCAAACGCAGCTGATCGTCCTACATCTTCAGAATTGCGGCCTGAAAAGCCCAATATGGATTCTCTATATATGCCTTGGGATCATGTGAATATGACACCCGATCATGTGAATATGACACCCTCATTTAGAGGTAGAGGCCTTTCAATACGGGGTGATAGTTCTTTAAGGAATGTGAGGAGTCGTTCTACACTTGATTTGGAATCCAACTTGGCTAGGACCCATTTATCAAATACTCATTCACACAACTCATTCCCTACTGGTCCCCAAATGGATCATTCTAGCATGGTAGATCTTTCAACTCAAACTTCTGGATCTTTGACAAGGGATTGGAGCCAAATGAGTGTATGTCCTGCTCATGGAAGGGTGCCATCATCAGATGCAAATGCTTTTAATCACGACGCAAGTCATTTCCTTGTTGGAAGTGGTTCTAGTAATGCTCCTGTAGATATTGGAGGTTTTCATAATGAATTTGGAACTAGCAGAAATCCTACTGCTCCACAAAGTTTTCATAATAATAGTCAGGCTCAACCTGCAAGAGGAGTTCACAGTAACTACTCTCAAAGATCCACTCCAACTTTTAGGGGTTCTTCCAGCTTGCGCTTGGGTCGCATGACACCTTCTGATGATGGATTGCATATGGTGGCTGAAAGTTACTCTTCTAGACATCCAAGGCCATTGACCACCATTGGCTGGCACAGCAATGATAGAAATGGAAGGTCAAGAATACATAGTGATAGATATCGAGCATTGGCTGATGAGGTTGGTCTCAATGATCAATTTAACTTTGAGGGTTTCATGATTGTTGATCGCACTTCGCTGTATGGTAGGAATATGCTTGATCAGCATAGAGAGATGAGGATGGACATAGACAACATGAGTTATGAGGAACTACTTGCACTCGGAGAGAGAATAGGCCATGTGAGCACAGGATTGTCTGAGGATTTGATCTCCAAGTATTTGACAGAAACGATATACTGTTCATCCGAGCCAAGTCAAGAAGACGAAGCTTGTGCAATCTGCCTGGAAGAATACAAGAACGTGGATGATGTCGGAACGCTGAAAGCTTGTGGGCATGATTACCATGTGAGTTGCATTAAAAAGTGGTTATCTATGAAGAAAGTGTGTCCTATCTGCAAAGCTTCTGCTTTACCTGAAGAAACGAAGGATAAATAA 1677 0.4264 MGHRHLYSSSPMFEGEPDPNWNHMHTDQQYVNLGRSTASDNGSFIYPLENMSIDSISFPSHWNTAPRSNGYASTSLNIEAPPHQTDVSGTSHDHFLHSSSGGMFYAVSENYVHQPSSSNYDRQSFPVADGGFIDLTMGNGRGPHKRKSPGVPSVCERGSTSRCFNAASANAADRPTSSELRPEKPNMDSLYMPWDHVNMTPDHVNMTPSFRGRGLSIRGDSSLRNVRSRSTLDLESNLARTHLSNTHSHNSFPTGPQMDHSSMVDLSTQTSGSLTRDWSQMSVCPAHGRVPSSDANAFNHDASHFLVGSGSSNAPVDIGGFHNEFGTSRNPTAPQSFHNNSQAQPARGVHSNYSQRSTPTFRGSSSLRLGRMTPSDDGLHMVAESYSSRHPRPLTTIGWHSNDRNGRSRIHSDRYRALADEVGLNDQFNFEGFMIVDRTSLYGRNMLDQHREMRMDIDNMSYEELLALGERIGHVSTGLSEDLISKYLTETIYCSSEPSQEDEACAICLEEYKNVDDVGTLKACGHDYHVSCIKKWLSMKKVCPICKASALPEETKDK* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03488 558 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 119 551 IPR045191 GO:0061630
Phac7g03488 558 Pfam Ring finger domain 504 547 IPR001841 -
Phac7g03488 558 MobiDBLite consensus disorder prediction 244 264 - -
Phac7g03488 558 CDD RING-H2_RNF24-like 503 550 - -
Phac7g03488 558 ProSiteProfiles Zinc finger RING-type profile. 505 547 IPR001841 -
Phac7g03488 558 SMART ring_2 505 546 IPR001841 -
Phac7g03488 558 SUPERFAMILY RING/U-box 495 550 - -
Phac7g03488 558 MobiDBLite consensus disorder prediction 335 369 - -
Phac7g03488 558 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 470 551 IPR013083 -
Phac7g03488 558 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 470 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03488 Phac-Chr7 36767743 36776555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03488 1 557 C3H Transcription Factor Family AT2G37150 40.989 1.09e-106 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03488 - - gmx:547939 967.992