Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03485 ATGTTGTTAGCTTATCTTTTTCTTCAAAAAATTCATATTACAGATCCAGATGCCGAGGTCATTGCTCTCTCGCCGAAGACCCTCATGGCCACGAACCGATTCATATGCGAGATATGCAATAAAGGGTTCCAGAGAGACCAAAACCTTCAGCTTCACCGAAGGGGTCACAACCTTCCATGGAAGCTACGACAGAGGTCCAACAAAGAGGTAAGGAAGAAGGTTTATATCTGCCCCGAACAATCCTGCGTCCACCACGACCCTGCAAGAGCACTCGGCGACCTCACTGGCATCAAAAAGCACTTCAGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGTGAAAAATGCTCCAAGAAATACGCAGTCCAATCAGATTGGAAAGCCCACGCCAAAACCTGTGGCACTAGAGAATACAAATGCGACTGTGGCACCCTCTTCTCCAGGAAGGACAGCTTCATTACCCACAGAGCATTTTGCGATGCCTTGGCAGAAGAGAGTGCGAGACTCACCTCAGTTACGTCAACAAATCTAAATTTCAAGAATGAAGAGGGTGGTAATGTGATGAACTCGCAGGCTGGTTTGGGAGGGCATGGGCTAATTGCAGCACAAGGTCTTCAAAATGTTTCTGGCATTCCACAATTTGGTTCACATGGTTTTCGCTTGGATTTTAATGGAATGGAACAACCAAGGCCTAGCTTGTCACTGTGGTTGAACCAGGGGAATCCCCAGATAAATAATAATAATGTTAACAGCAACAATAATGGTCCTGATGTGGGGCCCAATTACATGTCGTCATGCTCTTCTTCAGGTTTGCCTGATATTGTGCAAATGGCTCAGGCTAATGCTTTGATGGGTTCTACATCGATGGTGTCTAATTTTGGAGTGCCTGCGGGTTCTAATTCCACCAGTGCAAATCTTTCTCTGTCGTCACTTCCCACTGGTAAAAGAGGGGAAGCAGGTGGAACTGTAGTGGACTTGGCGTCTATTTATAACTCTGAGGGTCCAAACAAGAATTCAAAGCCTGCTTCACCTATGTCAGCCACTGCACTTCTTCAGAAAGCAGCGCAGATGGGATCCACCAGAAGCACCAACCCTTCCATTTTCAGTGGTAGTTTTGGAGTGATGAACTCACCTTCCTCACAAACTACCAGTCTCAATAATAACAACAACGGCGGTGCAGCCATGATGCTGGGAAGTAATACCACTGCTGCAACTGATTTTACCTCATTGACGCATTCATCAAACAGTTTTGACCAACTCGTGATGCAAACCAATGCGCAGTTGCATAGTGAACCTGTGAAGCTGAAGCTTCGTTCAAGCGCCGTGGAGCACAATTTGACAAGGGATTTTCTTGGTGTCAGCGGAGGAGGAGGAGGTGGTGGTGGACCTCAGTTCCTACCCCAAGAACTTGCAAAGTTTGCTTCCTTAGGGTCGCCTATGGGGTTGAGCCATTTCACAAGTAACCAATGA 1467 0.469 MLLAYLFLQKIHITDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVRKKVYICPEQSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARLTSVTSTNLNFKNEEGGNVMNSQAGLGGHGLIAAQGLQNVSGIPQFGSHGFRLDFNGMEQPRPSLSLWLNQGNPQINNNNVNSNNNGPDVGPNYMSSCSSSGLPDIVQMAQANALMGSTSMVSNFGVPAGSNSTSANLSLSSLPTGKRGEAGGTVVDLASIYNSEGPNKNSKPASPMSATALLQKAAQMGSTRSTNPSIFSGSFGVMNSPSSQTTSLNNNNNGGAAMMLGSNTTAATDFTSLTHSSNSFDQLVMQTNAQLHSEPVKLKLRSSAVEHNLTRDFLGVSGGGGGGGGPQFLPQELAKFASLGSPMGLSHFTSNQ* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03485 488 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Phac7g03485 488 Gene3D Classic Zinc Finger 89 167 - -
Phac7g03485 488 SMART c2h2final6 75 105 IPR013087 -
Phac7g03485 488 SMART c2h2final6 110 130 IPR013087 -
Phac7g03485 488 SMART c2h2final6 34 56 IPR013087 -
Phac7g03485 488 Pfam Zinc-finger double-stranded RNA-binding 34 56 IPR022755 -
Phac7g03485 488 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 56 IPR013087 -
Phac7g03485 488 FunFam protein indeterminate-domain 12-like 13 81 - -
Phac7g03485 488 Gene3D Classic Zinc Finger 12 86 - -
Phac7g03485 488 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 14 462 IPR031140 -
Phac7g03485 488 FunFam protein indeterminate-domain 5, chloroplastic-like 88 167 - -
Phac7g03485 488 SUPERFAMILY beta-beta-alpha zinc fingers 33 130 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03485 Phac-Chr7 36728228 36732394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03485 13 167 IDZ Gene Family AT5G66730 90.323 9.73e-108 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g03485 zf-C2H2_jaz 7.1e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03485 K25870 - gmx:100801182 737.643