Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03484 ATGCAAATGATGCCCGGTGACCCCTTTTCCCTATCCACTTCCATCGGAGGCTTCACTCAAGAGCAAAATACAAACCCTAACCCTAAACCTAACCCCCCTCCCAAGAAGAAGAGAAACCTTCCAGGAACACCAGATCCAGATGCCGAGGTCATTGCTCTCTCGCCGAAGACCCTCATGGCCACGAACCGATTCATATGCGAGATATGCAATAAAGGGTTCCAGAGAGACCAAAACCTTCAGCTTCACCGAAGGGGTCACAACCTTCCATGGAAGCTACGACAGAGGTCCAACAAAGAGGTAAGGAAGAAGGTTTATATCTGCCCCGAACAATCCTGCGTCCACCACGACCCTGCAAGAGCACTCGGCGACCTCACTGGCATCAAAAAGCACTTCAGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGTGAAAAATGCTCCAAGAAATACGCAGTCCAATCAGATTGGAAAGCCCACGCCAAAACCTGTGGCACTAGAGAATACAAATGCGACTGTGGCACCCTCTTCTCCAGGAAGGACAGCTTCATTACCCACAGAGCATTTTGCGATGCCTTGGCAGAAGAGAGTGCGAGACTCACCTCAGTTACGTCAACAAATCTAAATTTCAAGAATGAAGAGGGTGGTAATGTGATGAACTCGCAGGCTGGTTTGGGAGGGCATGGGCTAATTGCAGCACAAGGTCTTCAAAATGTTTCTGGCATTCCACAATTTGGTTCACATGGTTTTCGCTTGGATTTTAATGGAATGGAACAACCAAGGCCTAGCTTGTCACTGTGGTTGAACCAGGGGAATCCCCAGATAAATAATAATAATGTTAACAGCAACAATAATGGTCCTGATGTGGGGCCCAATTACATGTCGTCATGCTCTTCTTCAGGTTTGCCTGATATTGTGCAAATGGCTCAGGCTAATGCTTTGATGGGTTCTACATCGATGGTGTCTAATTTTGGAGTGCCTGCGGGTTCTAATTCCACCAGTGCAAATCTTTCTCTGTCGTCACTTCCCACTGGTAAAAGAGGGGAAGCAGGTGGAACTGTAGTGGACTTGGCGTCTATTTATAACTCTGAGGGTCCAAACAAGAATTCAAAGCCTGCTTCACCTATGTCAGCCACTGCACTTCTTCAGAAAGCAGCGCAGATGGGATCCACCAGAAGCACCAACCCTTCCATTTTCAGTGGTAGTTTTGGAGTGATGAACTCACCTTCCTCACAAACTACCAGTCTCAATAATAACAACAACGGCGGTGCAGCCATGATGCTGGGAAGTAATACCACTGCTGCAACTGATTTTACCTCATTGACGCATTCATCAAACAGTTTTGACCAACTCGTGATGCAAACCAATGCGCAGTTGCATAGTGAACCTGTGAAGCTGAAGCTTCGTTCAAGCGCCGTGGAGCACAATTTGACAAGGGATTTTCTTGGTGTCAGCGGAGGAGGAGGAGGTGGTGGTGGACCTCAGTTCCTACCCCAAGAACTTGCAAAGTTTGCTTCCTTAGGGTCGCCTATGGGGTTGAGCCATTTCACAAGTAACCAATGA 1557 0.4778 MQMMPGDPFSLSTSIGGFTQEQNTNPNPKPNPPPKKKRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVRKKVYICPEQSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARLTSVTSTNLNFKNEEGGNVMNSQAGLGGHGLIAAQGLQNVSGIPQFGSHGFRLDFNGMEQPRPSLSLWLNQGNPQINNNNVNSNNNGPDVGPNYMSSCSSSGLPDIVQMAQANALMGSTSMVSNFGVPAGSNSTSANLSLSSLPTGKRGEAGGTVVDLASIYNSEGPNKNSKPASPMSATALLQKAAQMGSTRSTNPSIFSGSFGVMNSPSSQTTSLNNNNNGGAAMMLGSNTTAATDFTSLTHSSNSFDQLVMQTNAQLHSEPVKLKLRSSAVEHNLTRDFLGVSGGGGGGGGPQFLPQELAKFASLGSPMGLSHFTSNQ* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03484 518 FunFam protein indeterminate-domain 12-like 43 111 - -
Phac7g03484 518 Gene3D Classic Zinc Finger 119 197 - -
Phac7g03484 518 Gene3D Classic Zinc Finger 42 116 - -
Phac7g03484 518 SMART c2h2final6 64 86 IPR013087 -
Phac7g03484 518 SMART c2h2final6 105 135 IPR013087 -
Phac7g03484 518 SMART c2h2final6 140 160 IPR013087 -
Phac7g03484 518 MobiDBLite consensus disorder prediction 1 48 - -
Phac7g03484 518 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 22 492 IPR031140 -
Phac7g03484 518 Pfam Zinc-finger double-stranded RNA-binding 64 86 IPR022755 -
Phac7g03484 518 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 86 IPR013087 -
Phac7g03484 518 FunFam protein indeterminate-domain 5, chloroplastic-like 118 197 - -
Phac7g03484 518 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Phac7g03484 518 MobiDBLite consensus disorder prediction 1 25 - -
Phac7g03484 518 SUPERFAMILY beta-beta-alpha zinc fingers 63 160 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03484 Phac-Chr7 36728228 36732394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03484 25 197 IDZ Gene Family AT3G50700 87.283 4.18e-117 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g03484 zf-C2H2_jaz 7.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03484 K25870 - gmx:100801182 801.201