Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03483 ATGGCAACTGAAGCTGCAGACTCTTCCAACCACAACAATAACCAAGGCCATGGCACCACTGGAAATAGAGTTGATATCCCAATTCAAAAGGGTCCAGCATCATCTGAAATAATTGAGGAATTCCCAAGAGATCAACATGGGACAAGGCAAAACTTTATCGTGGATATACCTGCAATATCTCAGGAGGAACTGAAAGAAGATTATGTGAGGATAAACATGCCTCTAACTCCACCTCCAAGAAGAGTGGTTTTTTCCCCTTGTCCAAGTCCTGTTTACCCAAGAAGCAAAGAATCCCCAGGTCCCTCTTCATCAAAAAATAGATCAAATATTAAAACCTTTCTTCCCAAACTCAGTTTTAAATTTCGCAACACAAGTTTGGAGATTGAAAAGGCTGCTTTCCTAGCACTTGGAGGATCAGCAACAGTGGCACCAAAAAAGCCTTTTCTTTCAAGGACATTATCTCTTGTCACACCCAGAGGGAATAAAACATCATCCTTACCTGTAACCCCGATTGCTCATTCAAATCCTGGGTCTGTACATGGCGGGAACATGACTTATGCAGAAACAGTTGAGAATGAAATGAAATTACCAATTCACCGTTCCCGTTCAGTACCTATGCTTAACAAAGAAGGTAACTCACCTATGCTTAACAAAGAAGGTATCTCACCCGTACCTGGCATGTTTCGTATAGTTCTGACCACATTACGATTGGATGATAAAATTGCCACAACACCTTTGACATCTCCGATTCATGATACTGTTCAAAATGAGGATGGTGGTGAAGATATTCCTGAAGAAGAAGCTGTTTGTAGAATTTGTATGGTTGAACTTGGAGAAGGTGCTGATACTTTTAAATTGGAGTGTAGCTGCAAAGGTGAGCTTTCATTGGCACACAAAGAATGTGCACTCAAATGGTTTACCATTAAAGGTAATAGAACATGTGAAGTGTGCAAACAAGAAGTTCAGAATCTACCCGTCACTCTTTTACGAGTTCAAAACGGTCAGGCCCATAACATACTGGGGCCAGAGGCTTCTCATTACAGGGTTTGGCAGGATGCTCCCGTTCTTGTTGTTATCAACATGCTGGCTTACTTTTGTTTTCTTGAGCAGCTTCTTGTGTCTAATATGGGATCCGGTTCTATTGCCATGTCTCTCCCATTTTCTTGTATATTGGGTCTTCTTGCAAGCATGACAGCTACAACAATGGTGAGGAGAAATCATGTTTGGATTTATGCAACTGTTCAATTTTGTCTGGTGGTTCTTGCTGGGCATCTTTTCTTTTCATTGGTTCATATGCAAGCTGTTCTTGCTATCCTACTAGCTACACTAACTGGGTTTGGAGTTGTAATGTGTGGAACTTCTGTTCTAATGGAGATTTTAAAGTGGAGGAGGAGATCCCTTGCTCAGTCAGATCAACAGCAAGTTTCCCAAGAGACAGTGCCACCAGATCAATCATCTAGAGTTGCTCATCAAACTCAAATTGGTTCTGAACAAACTGAAAGCAATTTGGGAGAGTCTCCTGAACAGAGGAGTTGA 1536 0.4147 MATEAADSSNHNNNQGHGTTGNRVDIPIQKGPASSEIIEEFPRDQHGTRQNFIVDIPAISQEELKEDYVRINMPLTPPPRRVVFSPCPSPVYPRSKESPGPSSSKNRSNIKTFLPKLSFKFRNTSLEIEKAAFLALGGSATVAPKKPFLSRTLSLVTPRGNKTSSLPVTPIAHSNPGSVHGGNMTYAETVENEMKLPIHRSRSVPMLNKEGNSPMLNKEGISPVPGMFRIVLTTLRLDDKIATTPLTSPIHDTVQNEDGGEDIPEEEAVCRICMVELGEGADTFKLECSCKGELSLAHKECALKWFTIKGNRTCEVCKQEVQNLPVTLLRVQNGQAHNILGPEASHYRVWQDAPVLVVINMLAYFCFLEQLLVSNMGSGSIAMSLPFSCILGLLASMTATTMVRRNHVWIYATVQFCLVVLAGHLFFSLVHMQAVLAILLATLTGFGVVMCGTSVLMEILKWRRRSLAQSDQQQVSQETVPPDQSSRVAHQTQIGSEQTESNLGESPEQRS* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03483 511 ProSiteProfiles Zinc finger RING-CH-type profile. 262 324 IPR011016 GO:0008270
Phac7g03483 511 SMART ringv_2 269 318 IPR011016 GO:0008270
Phac7g03483 511 MobiDBLite consensus disorder prediction 1 22 - -
Phac7g03483 511 MobiDBLite consensus disorder prediction 82 109 - -
Phac7g03483 511 MobiDBLite consensus disorder prediction 1 34 - -
Phac7g03483 511 SUPERFAMILY RING/U-box 266 321 - -
Phac7g03483 511 CDD RING_CH-C4HC3_MARCH 270 318 - -
Phac7g03483 511 Pfam RING-variant domain 270 317 IPR011016 GO:0008270
Phac7g03483 511 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 325 IPR013083 -
Phac7g03483 511 MobiDBLite consensus disorder prediction 470 511 - -
Phac7g03483 511 PANTHER OS02G0165000 PROTEIN 12 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03483 Phac-Chr7 36715433 36721690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03483 264 324 C3H Transcription Factor Family AT2G37950 43.548 6.37e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03483 - - gmx:100787963 869.381