Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03479 ATGGGCAACATAGGAAGCAGCGGCTCCAACAGCCGTCGGAGACACGGCGGTGGTGGCAGCGGGAGGCGGATTCACCCGCCGCCTCCTCCTCATCCGCCGGTGATGCCTCCGCCGGAAGTCACGGCGAACCGGTTCGTGTACCCTCCTGCCGCCACGCCGTATCACAACTACCCCGGATACTACCCGCCGCCGACTACCATGCCGGCGCCTTTGCCGGCTCCTTTCGACCACCACCACCGTCCGTCAGTGGACCCGATGTGGGGGAGGTACCCGGCGGCTCCGGCACCGACGCCGTATGTGGAGCACCAAAAGGCTGTTACTATAAAAAACGATGTCAACATCAAGAAGGAGACGCTAAGGATTGAGCCTGATGAAGAGAATCCTGGCCGTTTCCTCGTGACGTTTACGTTTGATGCCACCGTTTCTGGGAGCATCACAATACTTTTCTTTGCAAAAGAAGGCGAAGGTTGCATCCTAATCCCAATGAAGGAAGACGTTTTTCCATCCCTGACTGTAAATTTCCAGCAAGGTCTTGGGCAGAAGTTTAAACAGCCAGCTGGAACTGGTATTGATTTTTCAATATTTGAGGAGTCTGAGTTATTGAATGTGGGGGACATTGATGTCTATCCCGTTGCAATTAAAGCAGATGCATCCTCTGGCAACCCTGATGAATCAAAATCAAATGAAACTCCATCATCTGGTAACACAAACTCTCAGATAACTCAAGCAGTGTTTGAGAAGGAGAAAGGAGAGTTTCAGGTGAAGGTTGTTAAGCAGATCTTATGGGTAAATGAAATGAGGTATGAACTGCAGGAAATATATGGTATTGGAAATTCAGTGGAGAGTGACTTGGATGGGAATGACCCAGGAAAAGAGTGTGTTATATGTTTGTCAGAGCCTCGTGACACAACTGTCCTTCCATGTCGCCACATGTGTATGTGTAGCGGATGTGCAAAGGTTTTGAGGTTCCAAACAAATAGATGTCCAATCTGCAGACAACCAGTTGAGAGGCTTTTGGAGATCAGAGTGGGGCCTGAACCTGAGGAATGA 1050 0.5019 MGNIGSSGSNSRRRHGGGGSGRRIHPPPPPHPPVMPPPEVTANRFVYPPAATPYHNYPGYYPPPTTMPAPLPAPFDHHHRPSVDPMWGRYPAAPAPTPYVEHQKAVTIKNDVNIKKETLRIEPDEENPGRFLVTFTFDATVSGSITILFFAKEGEGCILIPMKEDVFPSLTVNFQQGLGQKFKQPAGTGIDFSIFEESELLNVGDIDVYPVAIKADASSGNPDESKSNETPSSGNTNSQITQAVFEKEKGEFQVKVVKQILWVNEMRYELQEIYGIGNSVESDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIRVGPEPEE* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03479 349 SMART ring_2 293 331 IPR001841 -
Phac7g03479 349 MobiDBLite consensus disorder prediction 1 42 - -
Phac7g03479 349 Pfam Zinc finger, C3HC4 type (RING finger) 291 337 - -
Phac7g03479 349 MobiDBLite consensus disorder prediction 23 42 - -
Phac7g03479 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 277 342 IPR013083 -
Phac7g03479 349 CDD mRING-HC-C3HC5_MGRN1-like 291 332 IPR045195 -
Phac7g03479 349 ProSiteProfiles Zinc finger RING-type profile. 293 332 IPR001841 -
Phac7g03479 349 PANTHER MAHOGUNIN 1 342 IPR045194 GO:0061630
Phac7g03479 349 SUPERFAMILY RING/U-box 292 338 - -
Phac7g03479 349 FunFam probable E3 ubiquitin-protein ligase LOG2 277 342 - -
Phac7g03479 349 MobiDBLite consensus disorder prediction 220 237 - -
Phac7g03479 349 MobiDBLite consensus disorder prediction 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03479 Phac-Chr7 36688792 36693410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03479 88 312 C3H Transcription Factor Family AT3G09770 64.530 1.06e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03479 - - gmx:100789032 576.63