Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac7g03479 | ATGGGCAACATAGGAAGCAGCGGCTCCAACAGCCGTCGGAGACACGGCGGTGGTGGCAGCGGGAGGCGGATTCACCCGCCGCCTCCTCCTCATCCGCCGGTGATGCCTCCGCCGGAAGTCACGGCGAACCGGTTCGTGTACCCTCCTGCCGCCACGCCGTATCACAACTACCCCGGATACTACCCGCCGCCGACTACCATGCCGGCGCCTTTGCCGGCTCCTTTCGACCACCACCACCGTCCGTCAGTGGACCCGATGTGGGGGAGGTACCCGGCGGCTCCGGCACCGACGCCGTATGTGGAGCACCAAAAGGCTGTTACTATAAAAAACGATGTCAACATCAAGAAGGAGACGCTAAGGATTGAGCCTGATGAAGAGAATCCTGGCCGTTTCCTCGTGACGTTTACGTTTGATGCCACCGTTTCTGGGAGCATCACAATACTTTTCTTTGCAAAAGAAGGCGAAGGTTGCATCCTAATCCCAATGAAGGAAGACGTTTTTCCATCCCTGACTGTAAATTTCCAGCAAGGTCTTGGGCAGAAGTTTAAACAGCCAGCTGGAACTGGTATTGATTTTTCAATATTTGAGGAGTCTGAGTTATTGAATGTGGGGGACATTGATGTCTATCCCGTTGCAATTAAAGCAGATGCATCCTCTGGCAACCCTGATGAATCAAAATCAAATGAAACTCCATCATCTGGTAACACAAACTCTCAGATAACTCAAGCAGTGTTTGAGAAGGAGAAAGGAGAGTTTCAGGTGAAGGTTGTTAAGCAGATCTTATGGGTAAATGAAATGAGGTATGAACTGCAGGAAATATATGGTATTGGAAATTCAGTGGAGAGTGACTTGGATGGGAATGACCCAGGAAAAGAGTGTGTTATATGTTTGTCAGAGCCTCGTGACACAACTGTCCTTCCATGTCGCCACATGTGTATGTGTAGCGGATGTGCAAAGGTTTTGAGGTTCCAAACAAATAGATGTCCAATCTGCAGACAACCAGTTGAGAGGCTTTTGGAGATCAGAGTGGGGCCTGAACCTGAGGAATGA | 1050 | 0.5019 | MGNIGSSGSNSRRRHGGGGSGRRIHPPPPPHPPVMPPPEVTANRFVYPPAATPYHNYPGYYPPPTTMPAPLPAPFDHHHRPSVDPMWGRYPAAPAPTPYVEHQKAVTIKNDVNIKKETLRIEPDEENPGRFLVTFTFDATVSGSITILFFAKEGEGCILIPMKEDVFPSLTVNFQQGLGQKFKQPAGTGIDFSIFEESELLNVGDIDVYPVAIKADASSGNPDESKSNETPSSGNTNSQITQAVFEKEKGEFQVKVVKQILWVNEMRYELQEIYGIGNSVESDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIRVGPEPEE* | 350 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac7g03479 | 349 | SMART | ring_2 | 293 | 331 | IPR001841 | - | |
Phac7g03479 | 349 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Phac7g03479 | 349 | Pfam | Zinc finger, C3HC4 type (RING finger) | 291 | 337 | - | - | |
Phac7g03479 | 349 | MobiDBLite | consensus disorder prediction | 23 | 42 | - | - | |
Phac7g03479 | 349 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 277 | 342 | IPR013083 | - | |
Phac7g03479 | 349 | CDD | mRING-HC-C3HC5_MGRN1-like | 291 | 332 | IPR045195 | - | |
Phac7g03479 | 349 | ProSiteProfiles | Zinc finger RING-type profile. | 293 | 332 | IPR001841 | - | |
Phac7g03479 | 349 | PANTHER | MAHOGUNIN | 1 | 342 | IPR045194 | GO:0061630 | |
Phac7g03479 | 349 | SUPERFAMILY | RING/U-box | 292 | 338 | - | - | |
Phac7g03479 | 349 | FunFam | probable E3 ubiquitin-protein ligase LOG2 | 277 | 342 | - | - | |
Phac7g03479 | 349 | MobiDBLite | consensus disorder prediction | 220 | 237 | - | - | |
Phac7g03479 | 349 | MobiDBLite | consensus disorder prediction | 217 | 237 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac7g03479 | Phac-Chr7 | 36688792 | 36693410 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac7g03479 | 88 | 312 | C3H Transcription Factor Family | AT3G09770 | 64.530 | 1.06e-101 | 301 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac7g03479 | - | - | gmx:100789032 | 576.63 |