Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03477 ATGGTCTTTCTCATTTTCTCCACACGCTCTTCTTCTCCAAAACCTTCATATATAGCCCCAAACCCCCATATCCAAGGGAGTGTTACACTTTTTCCCAGGACAAGCATGAAAATTCCTTTTTTTACTTGTTTTTCTTCAGCCACCAAAGAACAAAAGAATAACGACAACCCAGAGGGAGAGATCAACGATGGGAGCTTCCGTTTGTTCACTTACAACCAATTGAAATTGGCCACGCGTAATTTCCATTCCTCGGAGAAGGTTGGAGAAGGTGGCTTTGGCTCTGTCTATAAGGGGAGGCTTCTGGATGGTTCTTTTGTGGCGGTGAAGGTGCTTTCGGTTGAGGTGGAATCCATGCGAGGAGAGAGGGAATTTGTGGCGGAATTGGCTACACTTGCAAACATCAAGCACCAAAATCTTGTAAGCTTGAAAGGGTGTTGTGTGGAAGGTTTCCATAGATATTTGGTCTATGATTATATGGAGAACAATAGCCTTTACAAAGCTTTTTTAGGTTCCGAGGAGAGAAGAATGAGATTCAGTTGGCAAACAAGGAAGGAAATATCCATAGGGGTTGCTCGGGGACTTGACTTTCTCCACGAAGAGCTTAAGCCTCATATCGTACACAGAGACATCAAAGCCAAAAATATTCTTCTTGATCGGAATTTCACTCCAAAGGTTTCAGATTTCGGTTTGGCAAAATTGCTAAGAGACGAAGCTTCTTACATCAGCACTCGGGTTGCAGGGACACTGGGTTATCTAGCTCCAGAATATGCCAATTCTGGACAGGTTTCACGAAAATCAGATGTTTACAGCTTTGGAGTGCTGCTTTTGCAAATTGTGAGTGGCCTAGCAGTGGTGGATGCCTATCAAGAGTTTGAACGTTTCATAGTGGAGAAGGTGTGGATAGCGTATCAATGTAACGATTTATTAAAACTGGTGGATCCCATGTTGAACAAAAATTTTCCGGATGAAGAAGCCATAAAGTTCCTCAAGGTGGGGCTACTATGTGTGCAAGAAACCGCGAAACTTCGGCCACGAATGTCAGAGGTTGTGGAGAAACTAACCAACAACGTTGATATGAAAGATGTTCACATTTCGAAACCAGGGTTCGTTGCTGATCTCGGGAAGATCAGAATCAAAAAACAAAACTCTTCCCACGAAAGAAGTTCTGCTGGAGCAACCTTCACAAGCTCCATTTGGAGTTCAGCCAATCTTGCTCGTTAG 1221 0.4349 MVFLIFSTRSSSPKPSYIAPNPHIQGSVTLFPRTSMKIPFFTCFSSATKEQKNNDNPEGEINDGSFRLFTYNQLKLATRNFHSSEKVGEGGFGSVYKGRLLDGSFVAVKVLSVEVESMRGEREFVAELATLANIKHQNLVSLKGCCVEGFHRYLVYDYMENNSLYKAFLGSEERRMRFSWQTRKEISIGVARGLDFLHEELKPHIVHRDIKAKNILLDRNFTPKVSDFGLAKLLRDEASYISTRVAGTLGYLAPEYANSGQVSRKSDVYSFGVLLLQIVSGLAVVDAYQEFERFIVEKVWIAYQCNDLLKLVDPMLNKNFPDEEAIKFLKVGLLCVQETAKLRPRMSEVVEKLTNNVDMKDVHISKPGFVADLGKIRIKKQNSSHERSSAGATFTSSIWSSANLAR* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03477 406 FunFam Putative LRR receptor-like serine/threonine-protein kinase 159 365 - -
Phac7g03477 406 FunFam Serine/threonine-protein kinase receptor 49 158 - -
Phac7g03477 406 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 63 401 - -
Phac7g03477 406 ProSiteProfiles Protein kinase domain profile. 81 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g03477 406 Gene3D Transferase(Phosphotransferase) domain 1 159 366 - -
Phac7g03477 406 Gene3D Phosphorylase Kinase; domain 1 42 158 - -
Phac7g03477 406 SUPERFAMILY Protein kinase-like (PK-like) 58 353 IPR011009 -
Phac7g03477 406 SMART serkin_6 81 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g03477 406 Pfam Protein kinase domain 81 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g03477 406 ProSitePatterns Protein kinases ATP-binding region signature. 87 109 IPR017441 GO:0005524
Phac7g03477 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Phac7g03477 406 CDD STKc_IRAK 87 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03477 Phac-Chr7 36677165 36679536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03477 69 397 Receptor kinase-like Gene Family AT1G07650 45.783 4.86e-92 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac7g03477 Pkinase 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03477 - - gmx:100801728 652.129