Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03451 ATGGCCAACAAATTACGTAATTCCCTCCCCAAAACATCCACATTTCTCATCCTCCTTCTACCCTTCTTTTTCTTCTCCCAAGTTTTCGCAGACACCTCTCCAACCACTTCTGTCTCTCCCAAAACCATATGCAAATCCACCCCAGACCCATCTTATTGCACTTCCCTGCTTCCTCCCCAAAACGCCAACGTTTACCACTATGGCCGCTTCTCAGTGAAAGAGTCTCTTTCACAGGCAACCAAGTTCTTGAACTTGGTTAACAGATACCTCCAACGCCGCTCCACTCTTTCAACCTCCGCAATCCACGCGCTCCAAGACTGTCAAACCCTCGCCGAACTCAACGTTGACTTTCTCTCCAGTTCCTTCCAAACGGTGAAAAGAACAACCAGGCTCCTTCCCACTTCACAAGCTGACGACATCCAAACCCTTCTCAGCGCCATTCTAACTAACCAACAAACCTGTTTAGAAGGCCTCCAAGCCACCGCTTCCGCTTGGCGTGTCAACAACGGACTCTTCCTCCCGCTTTCCAACGATACCAAGCTCTACAGTGTCTCTCTTGCCCTCTTCACCAAGGGCTGGGTCCCCACCAACGCTAACGTCACCGAGTTTCACCCACCCGCCAAACACCGCGCCTTTCGAAACGGGCGTTTACCGCTCAAAATGTCCAGCAGAACGCGCGCAATCTACGAGTCCGTGAGTCGGAGAAAGCTTCTTCAGGCGAATGTGGGTGACGAGGTGAAGGTGATGGACATCGTCACTGTTAGCAAAGATGGTAGCGGGAACTTCACCACCTTGAACGACGCCATTGCGGCGGCGCCCAACAAGTCTTCCTCTACATCGGGGTACTTCCTCATCTACGTAACTGCAGGTGTTTACGAGGAAAACGTGTCCATTGATAAGAAAAAGAAGTACTTGATGATGGTTGGAGATGGCATCAACAAGACAATTATTACAGGGAACCGCAGTGTTGTTGATGGCTGGACAACCTTCAAGTCGGCAACTTTTGCGGTGGTTGGAGAAGGATTTGTGGGTGTTAACATGACGATCCGTAACACTGCTGGAGCAGAGAAGCACCAAGCCGTAGCACTTCGTAACGGGGCAGATTTATCGACGTTCTACAGTTGCAGTATGGAGGGGTACCAAGACACGCTCTATGCGCACTCCCTGCGACAACTCTACAGGGAATGCGACATCTACGGCACCGTGGATTTCATATTCGGAAACGCGGCGACAGTGTTGCAAAACTGTAACATGTATCCTCGCCTTCCAATGAATGGTCAATTCAACGCCATAACCGCACAAGGCAGAACCGACCCCAACCAAAACACTGGAATTTCTATCCACAATTGTACGATTAGAGCAGCCGATGATTTGGCTGGGAACATAAACGCGGCTGAAACTTATCTGGGAAGGCCTTGGAAAAATTACTCAAGGACGGTTTACATGCAGAGTTTTATGGACAGTGTGATCCATGCAGCTGGGTGGCGTGAATGGAACGGTGATTTCGCTTTGACCACTTTGTATTATGCAGAGTTTAACAACACTGGACCTGGATCTACTACTGCCAACAGAGTCACGTGGCCTGGTTACCATGTCATTAACGCCACCGATGCTGCTAATTTTACCGTCTCTAACTTCTTGATCGGAGATAACTGGCTCCCCCAGACCGCAGTGCCTTACGCAAGTAACTTCGTATAG 1698 0.4982 MANKLRNSLPKTSTFLILLLPFFFFSQVFADTSPTTSVSPKTICKSTPDPSYCTSLLPPQNANVYHYGRFSVKESLSQATKFLNLVNRYLQRRSTLSTSAIHALQDCQTLAELNVDFLSSSFQTVKRTTRLLPTSQADDIQTLLSAILTNQQTCLEGLQATASAWRVNNGLFLPLSNDTKLYSVSLALFTKGWVPTNANVTEFHPPAKHRAFRNGRLPLKMSSRTRAIYESVSRRKLLQANVGDEVKVMDIVTVSKDGSGNFTTLNDAIAAAPNKSSSTSGYFLIYVTAGVYEENVSIDKKKKYLMMVGDGINKTIITGNRSVVDGWTTFKSATFAVVGEGFVGVNMTIRNTAGAEKHQAVALRNGADLSTFYSCSMEGYQDTLYAHSLRQLYRECDIYGTVDFIFGNAATVLQNCNMYPRLPMNGQFNAITAQGRTDPNQNTGISIHNCTIRAADDLAGNINAAETYLGRPWKNYSRTVYMQSFMDSVIHAAGWREWNGDFALTTLYYAEFNNTGPGSTTANRVTWPGYHVINATDAANFTVSNFLIGDNWLPQTAVPYASNFV* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03451 565 PANTHER PECTINESTERASE 25 554 - -
Phac7g03451 565 SUPERFAMILY Pectin lyase-like 251 561 IPR011050 -
Phac7g03451 565 FunFam Pectinesterase 41 191 - -
Phac7g03451 565 Pfam Pectinesterase 252 550 IPR000070 GO:0030599|GO:0042545
Phac7g03451 565 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Phac7g03451 565 FunFam Pectinesterase 245 564 - -
Phac7g03451 565 Gene3D - 246 564 IPR012334 -
Phac7g03451 565 SMART PMEI_2 35 188 IPR006501 GO:0004857
Phac7g03451 565 Pfam Plant invertase/pectin methylesterase inhibitor 41 188 IPR006501 GO:0004857
Phac7g03451 565 NCBIfam pectinesterase inhibitor domain 15 163 IPR006501 GO:0004857
Phac7g03451 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 191 IPR035513 -
Phac7g03451 565 CDD PMEI-like_3 42 193 - -
Phac7g03451 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 191 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03451 Phac-Chr7 36383472 36385539 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03451 14 565 Carbohydrate Esterase AT4G02330 62.676 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03451 K01051 - gmx:100790729 967.222