Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03443 ATGTGTGGCGGTGCCATCATCGCTGACTTCATACCCCGCCGTGGCCGCTGCGTTGCTGCCTCTGAGCTCTGGCCAAACTCCTTCGGAAAGGACGATGACTTTGCCTTCGGTTACTCCAACATCGCTAATCAAGAGCCCTCCACTCTCAAAACGGCCCAACCTCCCAAAGTTAGTGAGAAAGTTGAGACCAAGCCAATGAAAAGGCAGAGGAAGAATCTCTATAGAGGGATTCGGCAGCGCCCTTGGGGCAAATGGGCTGCGGAGATTCGCGATCCTAGAAAAGGGGTTCGTGTCTGGCTGGGCACCTTCAACACTGCGGAAGAAGCCGCAAGGGCTTATGATCGTGAAGCTCGAAAAATCCGCGGCAAAAAAGCTAAGGTGAATTTCCCTAACGAGGACGATGATTATTCCATTCAAGCTCGTAATCCAATTCCAACTCTTCCTTTCGCAAACCAAAACGCTACCCCATATCAGCAACAGTACCGCTGTGATCTCAATAATGCCCCTTCAAATCTCAACTTCGAGTTTGGTTATGACCTGAACCACACTGGGGCATTTTCATCTCACGTGGAAGCTGTCAAAGCTGACTCGGTTGTTGTTTCCGGCGACGAAAATTCAGGGTTAGCGTCGCGTTCAGAGGGCGCTCATTCGACAAGCGAGTTCATGGGGTCTTGTCAGAAGGTGAACGGTTATTTTAGTAGTACAGTGGTTGAGAAGGAGAAAGAGATAGAGGTGATCGGAGCTGAAGAGGAAAAGAACAAATTGCAGGAGCTTTCCGAGGAACTGATGGCTTACGAGAACTACATGAAGTTTTATCAGATTCCGTACTATGATGGACAATCTATGCCACCGAATAATGTTCAGGAAAGTATTGTCGGGGATCTATGGAATTTCGATTGA 900 0.4867 MCGGAIIADFIPRRGRCVAASELWPNSFGKDDDFAFGYSNIANQEPSTLKTAQPPKVSEKVETKPMKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDDYSIQARNPIPTLPFANQNATPYQQQYRCDLNNAPSNLNFEFGYDLNHTGAFSSHVEAVKADSVVVSGDENSGLASRSEGAHSTSEFMGSCQKVNGYFSSTVVEKEKEIEVIGAEEEKNKLQELSEELMAYENYMKFYQIPYYDGQSMPPNNVQESIVGDLWNFD* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03443 299 Coils Coil 238 268 - -
Phac7g03443 299 FunFam Ethylene-responsive transcription factor 2 72 131 - -
Phac7g03443 299 Pfam AP2 domain 74 122 IPR001471 GO:0003700|GO:0006355
Phac7g03443 299 PANTHER DNA-BINDING DOMAIN 54 224 IPR044808 GO:0003700|GO:0009873
Phac7g03443 299 Gene3D AP2/ERF domain 73 131 IPR036955 GO:0003700|GO:0006355
Phac7g03443 299 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Phac7g03443 299 CDD AP2 74 131 IPR001471 GO:0003700|GO:0006355
Phac7g03443 299 MobiDBLite consensus disorder prediction 48 68 - -
Phac7g03443 299 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
Phac7g03443 299 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Phac7g03443 299 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Phac7g03443 299 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03443 Phac-Chr7 36336292 36338692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03443 1 131 AP2-EREBP Transcription Factor Family AT3G16770 55.147 3.28e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac7g03443 AP2 8.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03443 K09286 - gmx:100780763 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g03443 7 36336292 36338692 Phac7g03443 7 36336292 36338692 ECH