Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03433 ATGGCAAAAGCAAATGGCAAGAACAAATCCACCGATGCGCTCCACCCACCCTACTTCCAGATGATCGCCGACGCAATAACGTCGTTGAAGGAACGCACCGGTTCGAGTCAACCCGCGATAGCCAAGTTCGTCGAGGACAAGCACAGCAAAGTTCTTCCTCCCAACTTCCGGAAACTTCTCTCCGTTCAGTTGAAAAGTTTGGTCAAATCGGAGAAGCTCTACAAGGTCAAGAACTCCTACAAGCTTTCTTCTACGCAAACCAAGAACCCCAAAACCGCTCCGAAAGACAAGAAGGTGACGGAGAAGACGAAGAGGCTGAGTCAGGTGAAGACGCCCGAAGCTCTGAAGAAGAAAGCACCCAACAAGAAGAAATATGTGGAGGCGGTGGCAGCCTCTGGAGGAGGGAAACTGAAGCAAGCCCCCAACAAGAAGAAATATGTGGAGGCGGTGGCAGCCTCCGGAGGAGGGAAAGTGAAGCGTTTGAGTCAGGTGAAGACCCCCGAGGCCATGAAGAAGAAGCCCAATTTATCACCTGCCAAGCGCAAGATCACTCCTAAACCTTCCAAGGACAAGAAGAAAGCTAGGAAATGA 591 0.511 MAKANGKNKSTDALHPPYFQMIADAITSLKERTGSSQPAIAKFVEDKHSKVLPPNFRKLLSVQLKSLVKSEKLYKVKNSYKLSSTQTKNPKTAPKDKKVTEKTKRLSQVKTPEALKKKAPNKKKYVEAVAASGGGKLKQAPNKKKYVEAVAASGGGKVKRLSQVKTPEAMKKKPNLSPAKRKITPKPSKDKKKARK* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03433 196 MobiDBLite consensus disorder prediction 150 196 - -
Phac7g03433 196 MobiDBLite consensus disorder prediction 91 123 - -
Phac7g03433 196 Pfam linker histone H1 and H5 family 15 82 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac7g03433 196 CDD H15 15 95 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac7g03433 196 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 14 84 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac7g03433 196 PANTHER HISTONE H1 9 182 - -
Phac7g03433 196 SUPERFAMILY "Winged helix" DNA-binding domain 13 95 IPR036390 -
Phac7g03433 196 SMART h15plus2 12 79 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac7g03433 196 MobiDBLite consensus disorder prediction 79 123 - -
Phac7g03433 196 Gene3D - 11 98 IPR036388 -
Phac7g03433 196 PRINTS Histone H5 signature 1 22 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phac7g03433 196 PRINTS Histone H5 signature 110 124 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phac7g03433 196 PRINTS Histone H5 signature 164 183 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phac7g03433 196 PRINTS Histone H5 signature 28 45 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03433 Phac-Chr7 36193902 36195390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03433 16 143 Single Myb Histone (SMH) Gene Family AT1G72740 30.534 1.00e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03433 K11275 - gmx:100306187 215.312