Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03406 ATGGAGCTCTCTGTGATTGCAAGAAACATGGAAGAAGTTGTCTTGTTGGTTGATGATTTGGAATCGGTTTCTGGTATTTCTCGCTGTAGAATATGTCATGAAGAGGAATTTGAGAGCACCAAAACCTTGGAAGCTCCTTGTGCTTGTTCGGGGACAGTTAAGTTTGCTCATAGAGACTGCATTCAGACGTGGTGCAATGAGAAAGGAAACACAACTTGTGAAATATGTCTCCAGCAATACGAACCTGGATATACAGCAGTTCAGAAGAAATCGCAAATAGCTGATGCAGCAATGACCATTAGGGATAGCCTGCAAATATCAATGACTGAACGAGAACCGTTAAACACAAGAATAATTGAGGGAAACAATTACTCTGAATGCACATATGCTGCGGATAGAAGCGCAGCTTGTTGTCGATCCCTGGCTTTAGCTGTAAGCATTGTCTAA 447 0.4206 MELSVIARNMEEVVLLVDDLESVSGISRCRICHEEEFESTKTLEAPCACSGTVKFAHRDCIQTWCNEKGNTTCEICLQQYEPGYTAVQKKSQIADAAMTIRDSLQISMTEREPLNTRIIEGNNYSECTYAADRSAACCRSLALAVSIV* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03406 148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 88 IPR013083 -
Phac7g03406 148 ProSiteProfiles Zinc finger RING-CH-type profile. 21 83 IPR011016 GO:0008270
Phac7g03406 148 FunFam E3 ubiquitin-protein ligase MARCH4 18 86 - -
Phac7g03406 148 Pfam RING-variant domain 29 76 IPR011016 GO:0008270
Phac7g03406 148 Pfam Protein of unknown function (DUF3675) 82 146 IPR022143 -
Phac7g03406 148 SMART ringv_2 28 77 IPR011016 GO:0008270
Phac7g03406 148 ProSiteProfiles Zinc finger RING-type profile. 29 76 IPR001841 -
Phac7g03406 148 CDD RING_CH-C4HC3_MARCH 29 76 - -
Phac7g03406 148 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 24 145 IPR033275 -
Phac7g03406 148 SUPERFAMILY RING/U-box 27 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03406 Phac-Chr7 35975840 35978745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03406 29 76 C3H Transcription Factor Family AT2G37950 44.898 1.96e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03406 - - gmx:100776501 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g03406 7 35975840 35978745 Phac7g03406 7 35975840 35978745 ECH
Phac1g03085 1 38911437 38913813 Phac7g03406 7 35975840 35978745 PCT