Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03337 ATGGATGCTAACTGTGGGTCCCTGGTAGAGACACAAGCCAAGATGCAACATAGTGAAAACGAGATGTTAGGCCTCAGAAAAGGTCCATGGACGGTTGACGAGGACACCATTCTGGCCAATTACATCGCCACCCATGGTGAAGGTCACTGGAATTCCCTCGCACCATCTGCAGGTTTGAGGAGGAGTGGGAAGAGTTGCAGATTAAGGTGGCTAAACTACTTGCGCCCCGATGTGCGGCGTGGAAACATCACACTCCAAGAACAAATACTAATTCTCGACCTTCACTCTCGGTGGGGCAACAGGTGGTCGAAGATTGCTCAGCACCTGCCAGGAAGAACGGACAATGAAATAAAGAACTATTGGAGGACGAGAGTGATAAAACAGGCGAAGCAACTAAGGTGCGATGTAAACAGCAAACAGTTCAGAGACACGTTGCGTTATGTGTGGATGCCGCGCTTACTGGAGCGGGTTCAGCCCACATCGCAAATTCTCCACCCTCAGATGGACCCGGGCCCAAGTGAAATTCAGGGCTTTCTTCAACAAACCGGGTTTCACGGTTTAGATTCGCTGACGGAGTGGGATAAAGGGAACCACCCCACCGGTTCTTACTCGGACTCATCGTCCTTGGAGCTCCAAGTTTATTCCAATTCAGACCATAGCGATTCTTCGGGTTCGGGTTCGGGTTCGGGTTTCGATATGTGGGGAAGTTTGAACATGCAGATGTTGGAAGAAGGAAACGGTGGGGGTGAATCGTTGGAAAGTTTGTGGAATGACCTCGAATTAAAATACAGTTCCCTTCCGTGA 804 0.5 MDANCGSLVETQAKMQHSENEMLGLRKGPWTVDEDTILANYIATHGEGHWNSLAPSAGLRRSGKSCRLRWLNYLRPDVRRGNITLQEQILILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVIKQAKQLRCDVNSKQFRDTLRYVWMPRLLERVQPTSQILHPQMDPGPSEIQGFLQQTGFHGLDSLTEWDKGNHPTGSYSDSSSLELQVYSNSDHSDSSGSGSGSGFDMWGSLNMQMLEEGNGGGESLESLWNDLELKYSSLP* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03337 267 Gene3D - 24 80 - -
Phac7g03337 267 CDD SANT 84 123 IPR001005 -
Phac7g03337 267 Gene3D - 84 125 - -
Phac7g03337 267 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Phac7g03337 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 129 IPR017930 -
Phac7g03337 267 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Phac7g03337 267 SMART sant 26 76 IPR001005 -
Phac7g03337 267 SMART sant 79 127 IPR001005 -
Phac7g03337 267 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Phac7g03337 267 Pfam Myb-like DNA-binding domain 80 123 IPR001005 -
Phac7g03337 267 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 24 195 IPR044676 GO:0003700|GO:0006355|GO:0043565
Phac7g03337 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 74 IPR017930 -
Phac7g03337 267 SUPERFAMILY Homeodomain-like 24 121 IPR009057 -
Phac7g03337 267 CDD SANT 29 74 IPR001005 -
Phac7g03337 267 FunFam MYB transcription factor 84 147 - -
Phac7g03337 267 FunFam Myb transcription factor 27 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03337 Phac-Chr7 35611114 35612590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03337 3 163 MYB Transcription Factor Family AT1G48000 66.049 1.00e-78 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac7g03337 Myb_DNA-binding 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03337 K09422 - gmx:778065 307.375