Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03323 ATGGAGGCTAGATTTGGTGCGGAAGCTTATCATCTTTTTGGTGTGGGTTCTTCCTCGGATTTGAGGGGTGTGGGGAAGAGGTCCTCGGAGTGGGATTTGAATGATTGGAGATGGGATGGCGATCTGTTCATCGCAAGCCGGTTGAATCCTGTGCCAGCGGATGGTGTGGGAGTGGGACAGCAATTTTTCCCTCTAGGGTCTGGGATCCCGGTGGCCGGAGGTCCCTCCAACAGTTCTTCCTGCTCTGAGGAAGTAGATCCTAGGGATCCCATGGGGAACAAGGAAGGGGACAAGAAAAGGAGAGTTATTGTGCTGGAGGATGATGGTTTGAATGAGGAAACGGGTACTCTTAGTTTAAAGCTTGGTGGGCATGCTTCTGCAGTGGTGGATAGGGAAGTTGCGAGCTGGGATGGTATGAATGGGAAGAAGAGTAGAGTATCTGGAAGTACTTCAAATCGAGCTGTTTGTCAGGTGGAGGACTGCAGTGCTGATCTAAGCAAAGCTAAGGATTATCACAGACGACATAAAGTTTGTGAGATGCACTCCAAGGCCAGTAGGGCACTTGTCGGAAATGCAATGCAGAGATTCTGTCAACAATGTAGCAGGTTTCACATGCTTCAAGAGTTTGATGAGGGAAAGAGAAGCTGCAGAAGACGCTTGGCAGGACATAATAAACGAAGAAGGAAAACGAATCATGAACCTGTTCCTAATGGAAGTTCATTAAATGATGATCAGACTAGTAGCTATCTGTTGATAAGTTTATTGAAGATACTTTCAAATATGCATTCTGACAGGTCAGATCAGACTACAGATCAGGATCTACTAACTCATATTCTGAGGAGTCTTGCTAGTCAGAATGGCGAGCAAGGGGGTAAGAACATTTCTAACCTTTTGCGAGAACCAGAGAATTTGTTGAGAGAAGGCGATTCATCAAGGAAGTCAGAGATGGTGTCAACTTTATTCTCCAATGGTTCTCAAGGTTCTCCAACTGTTACAAGACAGCATGAAGCTGTGTCCATGGCTAAACTGCAGCAACAAGTTATGCATGCACATGATGCTAGGGCCTCTGATCAGCAAATTACATCTTCTATAAAGCCCAGCATGTCAAACAGTCCTCCGGCATACTCAGAAGCCAGAGACAGTACTTCTGGACAGATCAAGATGAATAATTTTGATTTAAATGACATATATATTGACTCAGATGATGGTATGGAAGATCTGGAAAGATTGCCTGTCTCAGCAAATCTTGTGACTAGCTCTCTTGATTACCCATGGGCACAACAAGATTCTCATCACTCAAGTCCACCTCAAACAAGTGGAAATTCTGATTCGGCTTCTGCCCAGTCTCCTTCTAGTTCCAGTGGAGAAGCTCAGAGTCGTACAGATCGAATTGTTTTTAAGCTCTTTGGTAAAGAGCCCAATGATTTTCCTCTTGTACTTAAAGCACAGATTCTTGACTGGTTATCTCACAGTCCTACTGATATGGAGAGCTACATTCGGCCTGGTTGTATTGTTTTGACCATTTATCTGCGTCAGGCTGAGGCTTTGTGGGAGGAACTTTGCTATGATCTGACTTCCAGTTTGAATAGGCTGTTGGATGTCTCAGATGACACTTTTTGGAGAAATGGATGGGTTCACATCAGGGTGCAGCACCAGATGGCCTTCATTTTTAATGGTCAAGTTGTCATAGATACCTCCTTACCCTTCAGAAGTAACAACTATAGCAAGATTTTGACTGTTAGTCCAATTGCTGTACCAGCATCAAAGAGAGCTCAGTTTTCTGTTAAGGGTGTCAACCTTATGTGCCCTGCCACTAGGTTAATGTGTGCTTTAGAAGGGAAATATGTGGTCTGTGAAGATGCTCATATGTCAATGGATCAGTGCGCCAAAGAGCCTGATGAACTTCAGTGCATCCAGTTTTCATGTTCTGTCCCTGTGATGAATGGACGAGGATTTATTGAGATTGAGGACCAGAGTTTGAGTAGCAGCTTTTTTCCTTTCATTGTTGTGGAGGAGGAGGATGTTTGCTCAGAAATCTGTACACTTGAGCCTCTTCTAGAAATAAGTGAAACTGACCCAGATATTGAAGGGACTGGAAAAGTTAAAGCCAAAAATCAAGCCATGGATTTTATTCATGAAATGGGTTGGCTTCTTCACAGAAGCCAGTTGAAATTAAGGATGGTTCACTTGAACTCTAACGTTGATCTCTATCCATTGAAACGGTTCAAGTGGCTTATGGAGTTTTCCATGGATCATGATTGGTGTGCAGCAGTGAAAAAACTTCTAAATCTACTGCTTGATGGAACTGTAAATATAGGAGATCATCCTTCCCTGTATCTTGCACTTTCAGAGATGGGACTCCTTCACAAAGCTGTAAGGAGAAATAGCAAGCAGTTAGTAGAGTTGCTTTTGGGATATGTTCCTGAGAATATTTCAGATGAACTAGGACCTGAAGTCAAGGCTCTAGTTGATGGAGAGAACAAGACCTTCTTGTTTAGACCTGATGTTGTTGGTCCTGCTGGTTTGACACCACTCCATATAGCAGCTGGGAAAGATGGTTCCGAGGATGTGCTCGATGCTTTAACTAATGATCCTTGCATGGTTGGAATTGAAGCATGGAAAAATGCTCGTGACAGCACAGGCTCTACACCTGAGGATTATGCACGTTTACGTGGTCATTATGCTTACATTCACTTGGTGCAGAAGAAAATTAACAAGAGACATGGAGCAGCTCATGTGGTAGTTGAGATTCCAAGTAACACGACAGAGAGCAATACAAACCAGAAGCAGAATGAGGCATCCTCTAGCTTTGAGATTGGAAAGCCTGCAGTAAGGCTTAGCCAAAGGCCTTGTAAACTCTGTGACAGTAAAATGTCCTGCAGAACCGCAGTAGGGAAGTCTATGGTATACAGACCCGCAATGCTCTCAATGGTAGCCATAGCTGCAGTCTGTGTCTGTGTGGCCCTTCTGTTTAAGAGCTCTCCCGAAGTAATATGTATGTTCCGACCCTTCAGATGGGAAACGTTGGACTTTGGAACAAGCTAA 3045 0.4394 MEARFGAEAYHLFGVGSSSDLRGVGKRSSEWDLNDWRWDGDLFIASRLNPVPADGVGVGQQFFPLGSGIPVAGGPSNSSSCSEEVDPRDPMGNKEGDKKRRVIVLEDDGLNEETGTLSLKLGGHASAVVDREVASWDGMNGKKSRVSGSTSNRAVCQVEDCSADLSKAKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNHEPVPNGSSLNDDQTSSYLLISLLKILSNMHSDRSDQTTDQDLLTHILRSLASQNGEQGGKNISNLLREPENLLREGDSSRKSEMVSTLFSNGSQGSPTVTRQHEAVSMAKLQQQVMHAHDARASDQQITSSIKPSMSNSPPAYSEARDSTSGQIKMNNFDLNDIYIDSDDGMEDLERLPVSANLVTSSLDYPWAQQDSHHSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLKAQILDWLSHSPTDMESYIRPGCIVLTIYLRQAEALWEELCYDLTSSLNRLLDVSDDTFWRNGWVHIRVQHQMAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAVPASKRAQFSVKGVNLMCPATRLMCALEGKYVVCEDAHMSMDQCAKEPDELQCIQFSCSVPVMNGRGFIEIEDQSLSSSFFPFIVVEEEDVCSEICTLEPLLEISETDPDIEGTGKVKAKNQAMDFIHEMGWLLHRSQLKLRMVHLNSNVDLYPLKRFKWLMEFSMDHDWCAAVKKLLNLLLDGTVNIGDHPSLYLALSEMGLLHKAVRRNSKQLVELLLGYVPENISDELGPEVKALVDGENKTFLFRPDVVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYARLRGHYAYIHLVQKKINKRHGAAHVVVEIPSNTTESNTNQKQNEASSSFEIGKPAVRLSQRPCKLCDSKMSCRTAVGKSMVYRPAMLSMVAIAAVCVCVALLFKSSPEVICMFRPFRWETLDFGTS* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03323 1014 Gene3D - 751 936 IPR036770 -
Phac7g03323 1014 SUPERFAMILY Ankyrin repeat 782 900 IPR036770 -
Phac7g03323 1014 MobiDBLite consensus disorder prediction 314 332 - -
Phac7g03323 1014 MobiDBLite consensus disorder prediction 286 332 - -
Phac7g03323 1014 MobiDBLite consensus disorder prediction 426 459 - -
Phac7g03323 1014 Gene3D - 146 217 IPR036893 GO:0003677|GO:0005634
Phac7g03323 1014 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 77 901 IPR044817 GO:0003677
Phac7g03323 1014 SUPERFAMILY SBT domain 154 234 IPR036893 GO:0003677|GO:0005634
Phac7g03323 1014 MobiDBLite consensus disorder prediction 349 383 - -
Phac7g03323 1014 Pfam SBP domain 156 229 IPR004333 GO:0003677
Phac7g03323 1014 MobiDBLite consensus disorder prediction 73 98 - -
Phac7g03323 1014 MobiDBLite consensus disorder prediction 351 383 - -
Phac7g03323 1014 ProSiteProfiles Zinc finger SBP-type profile. 153 230 IPR004333 GO:0003677
Phac7g03323 1014 FunFam Squamosa promoter-binding-like protein 14 147 217 - -
Phac7g03323 1014 MobiDBLite consensus disorder prediction 220 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03323 Phac-Chr7 35483237 35489861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03323 1 1014 SBP-box Gene Family AT3G60030 53.794 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Phac7g03323 SBP 4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03323 - - gmx:100814273 1869.74