Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03321 ATGAACTCAAAAGTAGTTATCTCTGGTGTTTCCCTCATCCTCGTGGTGGGTGTTGCCATCGGTGTTGTGGTTGTGGTTAACAAAAAGGACTCAGATCCTCAAATAGCTGCTCAACAAAAGAGAGTGAAGGCAATGTGCGAAAGCACCGAAGACCCTCAGCTTTGTCACAAAACTCTCAGCACTGTGAAAGGCGGTAACACCTCAGACCCAAAGGTTTACATAGCAGCAGGAGTGGAAGCAACGATGAAAAGTGTGATCCAAGCTTTGAACATGAGTGACAGGCTGAAAGTGGAGCATGGAGACAAAGACCCTGGCATAAAAATGGCCCTGGATGATTGCAAAGACTTGATCGAATTCGCGTTGGACAGCATCGAGTCCTCCATTAACTTGGTTAACAACCAGAACATTCAAGCCATGTATGACCAATCCCCAGACTTCAGAAACTGGTTGAGTGCTATAATCTCGTATCAGGAGTCATGCACGGATGGGTTTAACAACGAGACAAACGGTGAGAAAGAAATTAAGGAAAAATTGAACACAGATAGTTTGGACGAAATGGGAAAGCTCACGGGCATAGTCCTTGACATTGTGACAAACTTGTCCACAATCCTTGAGAGTTTTGACTTGAAGTTGAATCTGAACCCTTCTTCTCGGCGTCTTCTACAGGTGGATAGTGAAGGATTACCTACGTGGTTCTCTGGTGCAGATCGGAAGCTCCTTGCTCAAGTGCAAAAAGGGGGAGCAGCCGCACCAAACGCAGTGGTTGCCAAGGATGGTAGTGGTAAATTCAAAAGCATTAAGGAAGCTATTGACGCCTACCCTGCAAATCTCCAAGGCAGATATGTGATTTACGTTAAGGCTGGGGTCTATGACGAGTACATCACAATTCCTAAGAAGTCAGCCAATATTCTCATTTATGGTGATGGCCCTGGAAAGACCGTTGTTACTGGTCACAAGAACTTTGTAGATGGCGTCAAAACAATGCAAACTGCTACCTTCGCCAACACTGCACCAGGATTCATCGCCAAGTCAATGACATTCGAGAACACCGCTGGTGCCGCCAAGCACCAGGCAGTGGCATTCAGAAACCAGGGAGACATGTCAGCAATCTTTGACTGCGCATTTCACGGTTACCAAGACACACTGTACGTTCACGCGAACCGTCAATTCTACCGCAACTGCGAAATCTCTGGAACAATCGACTTCATCTTCGGAGCATCTGCTACTGTGATCCAGAACTCCAAAATCATCGGAAGGTTGCCACAAGCTAACCAGTTCAACACAGTGACCGCTGACGGAACGAAGCTGAAGAACATGGCTACAGGGATCGTGCTCCAGAACTGCGAGATAGCGCCAGAGCAGGCTCTTTTCCCTTCTAGGCTTAAAATTAAATCGTACTTGGGGAGGCCATGGAAGCAATTTTCAAGAACTGTTGTCATGGAATCTAACATAGGTGACTTTATTACTGCAGAAGGGTGGAACGTTTGGGATGGGAACTTGTATCTTGACACCTTGTACTATGCTGAGTATGCTAACACTGGACCTGGTTCCAACATTCAAGGAAGGGTAAAGTGGAAGGGCTACCGTGGAAATATTAATAAGAACGAAGCCACACAATTCACTCCTGGCCAATTCCTCAGAGGTGGAACTACCGGGAATGCTGATGATTGGTTGAAGGCTTCTGGTGTTCCTTACGCCGTTGGATTCATGAAAGCTTGA 1719 0.4648 MNSKVVISGVSLILVVGVAIGVVVVVNKKDSDPQIAAQQKRVKAMCESTEDPQLCHKTLSTVKGGNTSDPKVYIAAGVEATMKSVIQALNMSDRLKVEHGDKDPGIKMALDDCKDLIEFALDSIESSINLVNNQNIQAMYDQSPDFRNWLSAIISYQESCTDGFNNETNGEKEIKEKLNTDSLDEMGKLTGIVLDIVTNLSTILESFDLKLNLNPSSRRLLQVDSEGLPTWFSGADRKLLAQVQKGGAAAPNAVVAKDGSGKFKSIKEAIDAYPANLQGRYVIYVKAGVYDEYITIPKKSANILIYGDGPGKTVVTGHKNFVDGVKTMQTATFANTAPGFIAKSMTFENTAGAAKHQAVAFRNQGDMSAIFDCAFHGYQDTLYVHANRQFYRNCEISGTIDFIFGASATVIQNSKIIGRLPQANQFNTVTADGTKLKNMATGIVLQNCEIAPEQALFPSRLKIKSYLGRPWKQFSRTVVMESNIGDFITAEGWNVWDGNLYLDTLYYAEYANTGPGSNIQGRVKWKGYRGNINKNEATQFTPGQFLRGGTTGNADDWLKASGVPYAVGFMKA* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03321 572 SMART PMEI_2 37 196 IPR006501 GO:0004857
Phac7g03321 572 SUPERFAMILY Pectin lyase-like 248 565 IPR011050 -
Phac7g03321 572 CDD PMEI-like_3 44 202 - -
Phac7g03321 572 PANTHER PECTINESTERASE 18 559 - -
Phac7g03321 572 FunFam Pectinesterase 247 569 - -
Phac7g03321 572 Gene3D - 247 569 IPR012334 -
Phac7g03321 572 FunFam Pectinesterase 38 201 - -
Phac7g03321 572 NCBIfam pectinesterase inhibitor domain 19 200 IPR006501 GO:0004857
Phac7g03321 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 201 IPR035513 -
Phac7g03321 572 Pfam Pectinesterase 252 548 IPR000070 GO:0030599|GO:0042545
Phac7g03321 572 Pfam Plant invertase/pectin methylesterase inhibitor 42 196 IPR006501 GO:0004857
Phac7g03321 572 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Phac7g03321 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 202 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03321 Phac-Chr7 35459817 35462260 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03321 5 570 Carbohydrate Esterase AT3G05610 40.455 1.11e-140 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03321 K01051 - gmx:100789650 927.161