Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03303 ATGGGCAAAGCCTCTAGTTCTTCCTCCTCTTCAATCACCAGCTGCAGGAACAACCCTTCCAATTCAACTGCATCCTCTCTCACACACCAACATAGTCAAGACCTTCGCACAGATCTTAGGCTTGGACTCAGCATTTCCGCCACTCAACATGTTGGCTCTTCCAGTTCAGGGGGGGCCTGGCAACCGATGCTGCCACATCTAAGTAGTTTTTCACAAGCTACTGAAGTGAATGATTGCAGCGATCATACCAGCTTCTTTGTGAAGGTGTACATGGAAGGCATTCCAATTGGTAGAAAACTCAATTTGTTAGCTCATGATGGCTATCACGAGTTAGTAAAGACCCTCGAACAAATGTTTGACACTACCATTCTGTGTATAATCTAA 384 0.4531 MGKASSSSSSSITSCRNNPSNSTASSLTHQHSQDLRTDLRLGLSISATQHVGSSSSGGAWQPMLPHLSSFSQATEVNDCSDHTSFFVKVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILCII* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03303 127 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 36 121 IPR003311 GO:0005634|GO:0006355
Phac7g03303 127 Pfam AUX/IAA family 74 123 IPR033389 -
Phac7g03303 127 Gene3D - 78 125 - -
Phac7g03303 127 ProSiteProfiles PB1 domain profile. 84 127 IPR000270 GO:0005515
Phac7g03303 127 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Phac7g03303 127 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03303 Phac-Chr7 35317381 35320058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03303 88 120 B3 DNA Binding Superfamily AT4G23980 48.485 1.67e-06 43.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Phac7g03303 AUX_IAA 9.3e-13 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03303 K14484 - gmx:100781660 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g03303 7 35317381 35320058 Phac7g03303 7 35317381 35320058 ECH